Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_2015 |
Symbol | |
ID | 5161315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2211195 |
End bp | 2212667 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640553938 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001235134 |
Protein GI | 148261007 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.427751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAG GACCTCGTCT CGATCTGCGA CATACTCAGT CGCTGGTGAT GACGCCTCAG CTGCGGCAGG CGATCCAGTT GCTGCAGTTC ACGAATGCCG AGGTCAGCCA GTTCATCGAG GATGAACTTC TCAAGAACCC GCTGCTCGAA CGGGTGGAGC CCGAAGCCGA CGCGGCGCTG CCCGTGCCGA GGAACGACGC TGCTTCCACC GAGAAGCCGA CGGGCGATAT TGGCGCGGAA CATGTGGTCG ATCCGGATCC CTCCGGCGCG AGCACGCCGC TCGATGTCGA TTTTTCGAAT GTCTATGACG CTGGCGGCGT GGGTGATGGA ACCGGTTCCG GCCTTTCGCC GGAGCGGGAT GACTGGATCG GCCAGATTGC CGACCGGCCG CCGGGGTTGC GGGAAAGCCT CGATCAGCAG GCGAGGCTCG CCTTTGCCGA CCCGGTGCGC CGCAGGATTG CGTTCGCACT CATCATGGCG CTCGACCCTG CCGGACGCCT GGCCGACCCG CCCGAGCAGA TCGCCGAACG TCTTGCAGTC GCCCCCGACA TGCTGGAGGC GGTGCGTCAG ACGATGATGC GTTTCGACCC GACCGGCATG TTTGCCCGCG ATCTGGCCGA ATGTCTCGCG GTTCAGCTCG ACGAGCGCAA TAGGCTGGAC CCTGCCATGC GCGCGCTGCT TGCCAATCTC GAACTTCTTG CCAGGCGCGA TCTTCGGTCA CTGATGGAGA TCTGCGGCGT CGATGCCGAA GATCTGCGCG ACATGATTGC CGAAATCCGC CGCCTCAACC CCAAGCCGGG GGCGATCTTC GATGTCACCC CCATGACGCC GTTGATCCCT GATGTCCTGA TGCGCCCGGG GCCGGATGGC GACTATTTTC TCGAACTGAA CCCCGAGACC ATGCCCCGCG TGCTCATCCG CCGAGGGTTC CACGCCCAAA TCGTCGCTCG TGCGTCCCGC GAGACGCGGC AATTTCTTTC CGAACGCGTA CAAAGCGCGA ACTGGCTGGT ACGTGCCCTC GAGTCCCGCG CGGAGACGAT CCTGCGCGTC GCCGGCGAGA TTGTGCGACA CCAGGACGCC TTCTTTCGCC ATGGGATCGG GTTTCTCCGG CCATTGACCC TGCGCGAAAT TGCCGCCGCT CTCGAGATAC ATGAAAGTAC GGTTAGCCGT GTCACGTCGA ACAAGGTGAT CGCCACACCG CGCGGCATTT TCGAGATGAA ATTTTTCTTC ACGACCGCGC TTGCGGGCGC GAATGGCGAA AGCCACAGCG CCGAGGCGGT GCGCCATCGC ATCTCGACGC TGATCGAGGG TGAGGCGGCG AACCGAATCC TCTCCGACGA TGCGCTTGCC AGATTGTTAC AAAAGGAAGG CATAGACATA GCCCGCCGAA CTGTGGCCAA ATACAGGGAA GCGTTGCGCA TTCCCGGCTC GGCGCAACGC AAGCGCGAAA AAGGGCTTCT GGCAGGAGGC TGA
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Protein sequence | MAIGPRLDLR HTQSLVMTPQ LRQAIQLLQF TNAEVSQFIE DELLKNPLLE RVEPEADAAL PVPRNDAAST EKPTGDIGAE HVVDPDPSGA STPLDVDFSN VYDAGGVGDG TGSGLSPERD DWIGQIADRP PGLRESLDQQ ARLAFADPVR RRIAFALIMA LDPAGRLADP PEQIAERLAV APDMLEAVRQ TMMRFDPTGM FARDLAECLA VQLDERNRLD PAMRALLANL ELLARRDLRS LMEICGVDAE DLRDMIAEIR RLNPKPGAIF DVTPMTPLIP DVLMRPGPDG DYFLELNPET MPRVLIRRGF HAQIVARASR ETRQFLSERV QSANWLVRAL ESRAETILRV AGEIVRHQDA FFRHGIGFLR PLTLREIAAA LEIHESTVSR VTSNKVIATP RGIFEMKFFF TTALAGANGE SHSAEAVRHR ISTLIEGEAA NRILSDDALA RLLQKEGIDI ARRTVAKYRE ALRIPGSAQR KREKGLLAGG
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