Gene Acry_1934 details

Gene Information

• Locus tag: Acry_1934
• Symbol: rplE
• ID: 5160844
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2126498
• End bp: 2127055
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640553855
• Product: 50S ribosomal protein L5
• Protein accession: YP_001235054
• Protein GI: 148260927
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.562319
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGG CCATTGCCAA GACCCGGCTT CAGCAGCACT ACGAGACCGT GGTGCGCGAG 
GCGCTGCAGA AGGAGTTCGG CTACACGAAC CCGATGCAGG TGCCGAAGCT TGAGAAGATC 
GTGATCAACA TGGGCGTCGG CGAGGCGGCC GCGGACCAGA AGAAGCTCGA CGCCGCGGTG 
GCCGAGCTGA CGCTGATCGC CGGCCAGAAG CCGGTCAAGA CGGTGGCGAA GAAGGCGATC 
GCCGGCTTCA AGATCCGCAA GGGCCTGCCG ATCGGCTGCA AGGTGACGCT GCGCCGCGCG 
CGGATGTACG AGTTCCTTGA CCGGCTGGTG ACGATCGCGC TCCCCCGCGT GCGCGACTTC 
CGCGGCATCT CGGGCAAGGG TTTCGACGGC CGCGGCAATT TCGCCATGGG TCTCAAGGAG 
CAGATCGTGT TCCCCGAGAT CGAGTACGAC AAGGTCGACG ACATGCGCGG CATGGACATC 
GTGTTCGTGA CCACGGCGCC GACCGATGCC GAGGCGAAGG CACTGCTCAA AGGGTTTGAG 
ATTCCGTTCG TCAACTGA 

 

Protein sequence

MSEAIAKTRL QQHYETVVRE ALQKEFGYTN PMQVPKLEKI VINMGVGEAA ADQKKLDAAV 
AELTLIAGQK PVKTVAKKAI AGFKIRKGLP IGCKVTLRRA RMYEFLDRLV TIALPRVRDF 
RGISGKGFDG RGNFAMGLKE QIVFPEIEYD KVDDMRGMDI VFVTTAPTDA EAKALLKGFE 
IPFVN