Gene Acry_1929 details

Gene Information

• Locus tag: Acry_1929
• Symbol: rpsE
• ID: 5160498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2124217
• End bp: 2124786
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640553850
• Product: 30S ribosomal protein S5
• Protein accession: YP_001235049
• Protein GI: 148260922
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGCG AACCGAGAGA AGGCCGGGGC CGCGAGCGCG AGCGGGATCG CGATGGCGAC 
GAGCTGATCG ACAAGCTCGT CACCATCAAC CGCGTCGCGA AAGTGGTGAA GGGCGGCCGT 
CGCTTCGCCT TCGCCGCCCT CGTGGTGGTG GGCGACCAGA AGGGCCGGGT CGGCTTCGGC 
GCCGGCAAGG CGAAGGAAGT CCCGGAAGCC ATCCGCAAGG CGACCGAGCG CGCGAAGCGC 
GGCATGATCC GCGTCCCGAT GAAGGAAGGC CGCACGCTGC ATCACGACAT CGAGGGCCGC 
TTCGGCGCCG GTCATGTCGT CCTGCGCGCG GCGCCCCCCG GCACCGGCAT CATCGCCGGC 
GGTCCGATGC GCGCGGTGTT CGAGACCCTC GGCATCGGCG ACGTCGTGGC GAAGTCGCTG 
GGCAGCCGCA ACCCGCACAA CATGGTGAAG GCCACGGTCG CGGCGCTTTC GCAGTGCGCG 
AGCCCGCGCA GCGTCGCCTC GCGTCGCGGC AAGAAGGTCG CCGACCTGTT CGGCCCGAAG 
CGCGAGAAGG AGGCCCCGGC CGATGTCTGA 

 

Protein sequence

MAREPREGRG RERERDRDGD ELIDKLVTIN RVAKVVKGGR RFAFAALVVV GDQKGRVGFG 
AGKAKEVPEA IRKATERAKR GMIRVPMKEG RTLHHDIEGR FGAGHVVLRA APPGTGIIAG 
GPMRAVFETL GIGDVVAKSL GSRNPHNMVK ATVAALSQCA SPRSVASRRG KKVADLFGPK 
REKEAPADV