| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1897 |
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| Symbol | |
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| ID | 5160526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2093516 |
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| End bp | 2094946 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640553818 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001235017 |
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| Protein GI | 148260890 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000214805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGAC CCCGACCCTC GCGCAAGGCG ACTGACCGGC TGCCGCCCTC CGGCGGCAGC
CTCGCCCTGG CCGATCCCGC CTCGCTGTCG GACCTGCCGC TGCCGCTGCT GGAATTCCAG
TCGCCGACGG CGGCGGTGAT CGCGACGCCG GTGTCGATCG TCTCGCGCTA CACCATGCTG
CTCGTCACCG CCCTGGTGGC GACGCTGATC GCCGTCGCGG CCGTCGTGCG CATTCCCAAG
GTGGTCTCGG CGCCCGGCCG GCTGGTCTCC ACCGCCCCGA ACGTCCTGCT CCAGCCCTTC
GACACCTCGA TCGTCCAGGC GATCGACGTC CACGAGGGCG AGATCGTCCA CAAGGGCGAG
ATCCTGGCGA AGCTGAACCC CACCTTCGCC AGCGCCAATC TGCGCGCGCT GAGCGCCGAG
GTGATCCAGC TCGCCGCCCG GCGCGACCGT CTCGCCGCCG AGGCGGGCGG CACCACCTAC
GCGCCGGCGC ATCCCAACGC GGCGCAGCGT CTCCAGGCCG CGATCTTCCA GAGCCGCAAG
GCCGAGCGCA TCTACACGAT CGAGAATTAC GACCAGAAGA TCGCCGAGCT GCGCATGATC
ATCGCCAAGA GCGACAGCGA GGCGGGGTTC TACCGCAAGC AGGTCGGCGT GGCGAAGGAT
GTCGAGCACA TGCGCGACCA GCTCCAGCGC ATGCAGGTCG GCAGCAAGCT CAACTCCCTG
CTTGCCCGGA ACGACCGGCT GACCGTGTCC AGCTCGCTCT CCAGCGCGCT GGCCACCGCC
GCCGCCGGCG AGCGCGACCT CGCCGCCCAG CAGGCCGAGC GCGACGCCTA TGAAAAGAAA
TGGATCGCCG ATGTCGGGGA GAAACTCGCC GAGACCGACA GCAAGCTGAT CGCCACCGAG
CAGGACCTCG CCAAGGCGCG GCTGCAGAGC CAGCTCGTGG TGATGCGCGC GCCGCGCGAC
GCCATCGTGC TCACCGTCGC CCATGTCTCG GTCGGCTCGG TGCTGCGGTC GGGGGCCAAG
TTCATCACCC TGGTGCCGCT GGACGCCCCG CTCGAGGTCG AGGCCGATAT CAGCGGCGCC
GAATCCGGCC ATGTCCATGT CGGCGATCCG GTCACGGTGA AATTCGCCAC CTTCGATTAC
CTGCGCTACG GCACCGCCCG CGGCACGCTC CGTTCGGTCA GCGCCGACAG TTTCAGCTCC
GACCAGCCGC CGGCGGAGGG CGCCTCGCCG CTGCCCAACC GGCCGCGCGG CCTCTACTAC
AAGGCCCGCA TCTCGATCGA CAGGCTGATG CTGCACGGCG TGCCGCCCAG CTTCCGCCTC
ACCCCCGGCA TGCCGCTCAC CGCCGACATC AAGACCGGCC GGCGCACCAT CCTCTCCTAT
TTCATGACCA AGCTGCTGCC GGTCGCGACC GACAGCATGC GCGAGCCCTG A
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| Protein sequence | MRRPRPSRKA TDRLPPSGGS LALADPASLS DLPLPLLEFQ SPTAAVIATP VSIVSRYTML
LVTALVATLI AVAAVVRIPK VVSAPGRLVS TAPNVLLQPF DTSIVQAIDV HEGEIVHKGE
ILAKLNPTFA SANLRALSAE VIQLAARRDR LAAEAGGTTY APAHPNAAQR LQAAIFQSRK
AERIYTIENY DQKIAELRMI IAKSDSEAGF YRKQVGVAKD VEHMRDQLQR MQVGSKLNSL
LARNDRLTVS SSLSSALATA AAGERDLAAQ QAERDAYEKK WIADVGEKLA ETDSKLIATE
QDLAKARLQS QLVVMRAPRD AIVLTVAHVS VGSVLRSGAK FITLVPLDAP LEVEADISGA
ESGHVHVGDP VTVKFATFDY LRYGTARGTL RSVSADSFSS DQPPAEGASP LPNRPRGLYY
KARISIDRLM LHGVPPSFRL TPGMPLTADI KTGRRTILSY FMTKLLPVAT DSMREP
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