Gene Acry_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1790 
Symbol 
ID5161197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp1972647 
End bp1973195 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID640553707 
Product2'-5' RNA ligase 
Protein accessionYP_001234912 
Protein GI148260785 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTTT TCATCGCCCT CGATCTGCCT TGGGAGATCC GGCAGACCCT GGCGGGCTTC 
GCCTTCAACC TGCAAGGCGC GCGCTGGGTG CCGGCGCAGA ACATGCACGT GACGCTGCGC 
TTCATCGGCG AGGCCAGCCG GCTCCAGGCC GAGGAGATCG ATCACGCGCT CGCCGCGATC 
CGCGCGCCGG GGTTTCCGCT TACCCTGGCC GGGGCGGGCT GGTTCGAGAA GGGCGGCCGG 
GTGACCTCGC TGTGGATCGG GGTGGACCGC AATCCGGCGC TGCTGCACCT GCAATCGAAG 
ATCGAGACCG CGCTGCGGCG GATCGGCCTG CCGCCGGAAC GCCGCCGCTA CGCGCCGCAC 
GTGACGCTGG CACGGATGGA TCTGCCGGTG GGACCGCGCT TCGCCGAATT CGTCCAGAGC 
CACAATCTCT ACCGCTCGCC GCCGATCGAG GTGGGGCACA TGACGCTGTT CAGCTCGCAC 
CTGAGCGACG ACCATCCGGC CTATACGGCG GAGGTCGAAT ACGAACTCGG CGCGGCGCCC 
GCGCCCTGA
 
Protein sequence
MRLFIALDLP WEIRQTLAGF AFNLQGARWV PAQNMHVTLR FIGEASRLQA EEIDHALAAI 
RAPGFPLTLA GAGWFEKGGR VTSLWIGVDR NPALLHLQSK IETALRRIGL PPERRRYAPH 
VTLARMDLPV GPRFAEFVQS HNLYRSPPIE VGHMTLFSSH LSDDHPAYTA EVEYELGAAP 
AP