| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1502 |
|---|
| Symbol | |
|---|
| ID | 5159866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1663732 |
|---|
| End bp | 1664775 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640553415 |
|---|
| Product | HhH-GPD family protein |
|---|
| Protein accession | YP_001234629 |
|---|
| Protein GI | 148260502 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCGGT CCCTGCCATC CGCCGAAAAT CTGCTCCGCT GGTATCATGT TCACCGGCGC
ATCCTGCCTT GGCGCGCCGG CCCGGGTACC CTGCCCGATC CCTATCATGT CTGGCTGAGC
GAAATCATGC TGCAGCAGAC AGTCGTAGCG ACTGTCATAC CTTATTTCCA TCGCTTCATC
GAGCGTTTCC CCACGATCAG CGACCTCGCG GTCGCGGTGG ATGATGAGAT TCTGGGCCTG
TGGGCGGGGC TTGGCTATTA CGCGCGGGCA CGCAACCTGA TCCGCTGCGC GAGGGCCGTC
GCCGAGGCGG GCGGGTTTCC CGTCACGCTC GACGGGCTAC GTGCGCTGCC CGGCATCGGC
CCTTATACGG CTGCGGCGAT CGGCGCGATC GCCTTCGATA TTCCGGTGGT TCCGGTGGAC
GGCAATGTCG AGCGGGTTAC CGCCAGGATG TTCGCGATCG AGGAGGCGTT GCCCGCGGCG
AAGGACGCGA TTGCGGTCGC CGCTGCCCGC CTTGGCGCGC AGGCGGCAGC GCAATCCAGC
CCAGGTGACT TTGCGCAGGC ATTGTTCGAT CTCGGAGCCA CCGTCTGCAC GCCGCGCAGT
CCATCATGCA TGGTCTGCCC GTGGCGCGAC GGATGCGCGG CACATGCCCG GGGGCTGTCC
GCCGACCTGC CGCGCAAGGC GAAGCGCGCG GCGCGGCCCG TGCGGCGCGG CACCGTGTTC
GTGATGCAGG ATCGATCCGG CATGATTGGC CTGCGCCGGC GGCCACCACG CGGATTGCTC
GGAGGGATGC TGGAGGTGCC GGGCACGGAT TGGGAGGCGA CAGCTCCGCC CCCGGTGCCG
CCATGCGCCG CGCATTGGCT TGATGCCGGC ACGATCATTC ACGTTTTCAC CCATTTCGAG
TTGCGCCTCA CCGTGAAGGC GGGCCGCGTC GCGGCGCTAC CCGGCGGGAT CGTCGCCGCG
CCGCCCGATA CGCCTCTGCC GACCGTGATG CGCAAGGCGC TGGAGGCCGG GCTTGCTGTT
CTCGATGAGC GGTCGCCGAA ATAA
|
|---|
| Protein sequence | MSRSLPSAEN LLRWYHVHRR ILPWRAGPGT LPDPYHVWLS EIMLQQTVVA TVIPYFHRFI
ERFPTISDLA VAVDDEILGL WAGLGYYARA RNLIRCARAV AEAGGFPVTL DGLRALPGIG
PYTAAAIGAI AFDIPVVPVD GNVERVTARM FAIEEALPAA KDAIAVAAAR LGAQAAAQSS
PGDFAQALFD LGATVCTPRS PSCMVCPWRD GCAAHARGLS ADLPRKAKRA ARPVRRGTVF
VMQDRSGMIG LRRRPPRGLL GGMLEVPGTD WEATAPPPVP PCAAHWLDAG TIIHVFTHFE
LRLTVKAGRV AALPGGIVAA PPDTPLPTVM RKALEAGLAV LDERSPK
|
|---|
| |