Gene Acry_1473 details

Gene Information

• Locus tag: Acry_1473
• ID: 5159529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 1637133
• End bp: 1637531
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640553386
• Product: flagellar motor switch protein FliN
• Protein accession: YP_001234600
• Protein GI: 148260473
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAACCGG AAAGGAAGAC GACCTTGTCA TCTGAAATCA CGACGCCAAC CGGAGAGCCG 
AATGGCAATG GCCAGGTGTT GTCGGACCTG CCGCTTGCGC CGGTTTCCCG CCGCACGGCG 
GGAGATGGGC CTGAGACCCA GCGCCCCAGC CGGGATCTTG AGGCTGTCTA CGATGTGCCC 
GTGCTCGTCA GTGCCGTGCT GGGTCGCTCG ACCATGCAGG TCAGCCAGTT GCTTAAGCTT 
GGTCGAGGCG CCGTCGTCGA ACTCGATCGT AAAGCCGGAG ACCCGATTGA TATCTTTGTC 
AACAATCGCC TGATTGCACG TGGCGAAGTG GTGATGCTCG ACGAAACGAA GCTCGGCATT 
ACCATGACCG AAATCGTCAA ATCTGACCGC AACGGTTGA 

 

Protein sequence

MEPERKTTLS SEITTPTGEP NGNGQVLSDL PLAPVSRRTA GDGPETQRPS RDLEAVYDVP 
VLVSAVLGRS TMQVSQLLKL GRGAVVELDR KAGDPIDIFV NNRLIARGEV VMLDETKLGI 
TMTEIVKSDR NG