Gene Acry_1220 details

Gene Information

• Locus tag: Acry_1220
• ID: 5159933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1357253
• End bp: 1359286
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640553134
• Product: transketolase
• Protein accession: YP_001234350
• Protein GI: 148260223
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGTA GCGACACCGC CGGCAACGAG ATTGCGCTGG AGCGCCAGAA GGCGGTCCTC 
GCCCGCCCGA TGACCGAGAC CCGCCGGCTT GCCAACGCCG TCCGCGCGCT CGCGATCGAC 
GGCGTCGAGG CCGCGAAGTC CGGCCATCCC GGCATGCCGA TGGGCATGGC CGATGTCGCG 
ACGGTGCTGT GGACGAAGTT CATGAAGTTC GACGCGGCCG ATCCCCACTG GCCCGACCGC 
GACCGCTTCA TCCTCTCCGC CGGCCACGGC TCGATGCTGC TCTACGCGCT GCTGCACCTC 
ACCGGCTACG AGGGCATGTC GATCGACGAT CTGCGCCAGT TCCGCCAGCT CGGCGCCCGC 
GCCGCCGGCC ATCCCGAGCG GATCGAGCAT CCCGCCATCG AAATGACCAC CGGCCCGCTC 
GGCCAGGGCA TCTCGACGGC GACCGGCTTC GCCCTCGCCG AGCGCATGCT CGCCGCCCGC 
TTCGGCAAGG GCCTGGTCGA TCACCGCACC TGGGTCATCG CCTCGGATGG CGACATGATG 
GAGGGCGTGT CCCACGAGGC CTGCGCCATC GCCGGCCATC TCGGCCTCGA CAAGCTCACC 
GTCTTCTACG ACGACAACTC GATCTCGATC GACGGCGGCA CCGACATCGC GATGACCGAC 
GACGTGCTGA AGCGCTTCGC CGGCTATGGC TGGGCCACCC GCCGGATCGA CGGGCACGAC 
CCCGAGCAGA TCGAATCCGC CATCCGCTTC GCCCTGCGCA GCCGCAAGCC GACGCTGATC 
GCCTGCCGCA CCATCATCGG CTTCGGCGCG CCGAAAAAGG CCGGCACCCC GGCCACCCAC 
GGCTCGCCCC TCGGCGCCGA CGAGGCCGCC GCCGCCAAGG CCCTGCTCGG CTGGACCGCG 
CCGCCCTTCA CCGTGCCGGA CGACATCCTC GCCCCCTGGC GCGCGGCCGG ATCGCGCAGC 
GCCGGCGCCC ACCGCGCCTG GACGAAGCGC CACGCCGCGA GCAACCAGCG CGCCGCCTTC 
GATGCCGCCC TCGCCGGCGA CCTGCCGGCC GACTACACCG CCGCGATGGC CGCCCTGCGC 
GAGAAGATCG CCGCCGAGAA GCCCAACGTC GCCACCCGCC AGGCCAGCCA GATGGCGCTC 
GACGCCGTGG TGCCCGTGGT CCCCGAAATG GTCGGCGGCT CGGCCGACCT CACCCCCTCG 
AACAACACCT TCGTGAAGTC GATGGGCGTA TTCACGGCGA AGGACCACGC CGGCCGCTAC 
ATCCATTTCG GCGTGCGCGA GCACGGCATG GGCACGACGC TGAACGGCCT CGCCCTGCAT 
GGCGGGCTGA TCCCCTATGG CGGCACGTTC TTCATCTTCT CCGACTATTG CCGCCCCGCC 
ATCCGCCTCG CCGCGCTGAT GCGCATCCGC TCGATCTTCG TGCTCACCCA CGATTCGATC 
GGCCTCGGCG AGGACGGGCC GACCCACCAG CCGGTCGAGC ACCTCGCCTC GTTCCGCGCC 
ATGCCCAACG TCCTCGTGCT GCGCCCCGGC GACGCGATGG AGACCGCCGA ATGCTGGGAC 
ATCGCGCTGA AGCACAAGGA CGGCCCGGTC CTGCTCGTGC TCAGCCGCCA GGCGATGCCG 
ACCCTGCCGC GCGACCACGG TGCTGAAAAC CTCTCCGCCC GCGGCGGCTA TGTCGTCGCC 
CCGGCCGCGG GGCCGCGCCG CGCCACCATC CTCGCCACCG GCTCGGAAGT CGCCCTCGCG 
CTCAAGGCGC GCGAGATGCT GGCGGCGGAG GGAATCACCG TCGCCGTCGC CTCGGTGCCG 
AGCTTCGAAC TGCTCGAACG CCAGGACCCC GGCTACCGCA CCGAGGTGCT GGGCGAGGCT 
CCGCGCGTCG GCGTCGAGGC CGCGGTCGGC TTCGGCTGGG AACGCCTGCT CGGGCCGGAC 
GGCACCTTCA TCGGCATGCA CGGCTTCGGC GCCAGCGCGC CCTACCAGAA GCTGTTCCAG 
CATTTCGGCA TCACCGCCGA GGCGGTCGTT GCGGCGGTGA AGGCGAAGCT GTAA 

 

Protein sequence

MASSDTAGNE IALERQKAVL ARPMTETRRL ANAVRALAID GVEAAKSGHP GMPMGMADVA 
TVLWTKFMKF DAADPHWPDR DRFILSAGHG SMLLYALLHL TGYEGMSIDD LRQFRQLGAR 
AAGHPERIEH PAIEMTTGPL GQGISTATGF ALAERMLAAR FGKGLVDHRT WVIASDGDMM 
EGVSHEACAI AGHLGLDKLT VFYDDNSISI DGGTDIAMTD DVLKRFAGYG WATRRIDGHD 
PEQIESAIRF ALRSRKPTLI ACRTIIGFGA PKKAGTPATH GSPLGADEAA AAKALLGWTA 
PPFTVPDDIL APWRAAGSRS AGAHRAWTKR HAASNQRAAF DAALAGDLPA DYTAAMAALR 
EKIAAEKPNV ATRQASQMAL DAVVPVVPEM VGGSADLTPS NNTFVKSMGV FTAKDHAGRY 
IHFGVREHGM GTTLNGLALH GGLIPYGGTF FIFSDYCRPA IRLAALMRIR SIFVLTHDSI 
GLGEDGPTHQ PVEHLASFRA MPNVLVLRPG DAMETAECWD IALKHKDGPV LLVLSRQAMP 
TLPRDHGAEN LSARGGYVVA PAAGPRRATI LATGSEVALA LKAREMLAAE GITVAVASVP 
SFELLERQDP GYRTEVLGEA PRVGVEAAVG FGWERLLGPD GTFIGMHGFG ASAPYQKLFQ 
HFGITAEAVV AAVKAKL