Gene Acry_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1196 
Symbol 
ID5162129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand- 
Start bp1333387 
End bp1334004 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID640553111 
Producthypothetical protein 
Protein accessionYP_001234327 
Protein GI148260200 
COG category[S] Function unknown 
COG ID[COG3548] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCATG AGGCGAGGGG TGGAGCGGGG CGCCGGCGCA TGGATCGCGA TCGCCTTGCC 
GCGTTCAGCG ACGGGGTGCT CGCCATCATC ATCACGGTGA TGGTGCTCGA GCTGAAGACG 
CCGTCCGGCC CCGAGCTTGC CGCGCTGTCC GCCAGCTTGC CGACGCTCGC CGGCTACGTG 
CTGAGCTTTC TCTATGTCGC CATCTACTGG AACAACCACC ATCATCTCTT CCAGCTGGTC 
GAGCGGGTGA ATGGCACGAT TCTCTGGGCC AACATCCACC TGCTGTTCTG GCTGTCGCTG 
ATCCCCTTCG CCACGGGCTG GCTCGGTGAG TACCCCCGCG CCTCGGGCCC GGCGGCGCTC 
TACGGCTTCG TCCTATTGAT GCCGGCGATT GCCTGGAAGA TCGCGCAGGC GGCGATCATC 
CACGCGCAGG GTCCAGACTC CCCTCTGGCG ACGGTGCTTG GTCGCGACAT CAAGGGGAAG 
ATTTCACCGC CGCTCTATCT CGCCGGCCTG GTCCTCGCCT TCGTCTCGCC CTGGATCGCC 
GATGGACTTT ATGCTCTGGT CGCCTTGTTG TGGTGCGTGC CGGACCGTCG GATCGAAGCG 
TTGTTCGACG GGCGCTGA
 
Protein sequence
MDHEARGGAG RRRMDRDRLA AFSDGVLAII ITVMVLELKT PSGPELAALS ASLPTLAGYV 
LSFLYVAIYW NNHHHLFQLV ERVNGTILWA NIHLLFWLSL IPFATGWLGE YPRASGPAAL 
YGFVLLMPAI AWKIAQAAII HAQGPDSPLA TVLGRDIKGK ISPPLYLAGL VLAFVSPWIA 
DGLYALVALL WCVPDRRIEA LFDGR