| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1188 |
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| Symbol | |
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| ID | 5161083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | + |
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| Start bp | 1323725 |
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| End bp | 1325557 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640553103 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001234319 |
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| Protein GI | 148260192 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCCCG TGCTGGACCT CGACCGGCTT TCGGTCACGC TGCGCCGGCG CGACGGCACC
CGCCTCGCGC TGCTGGAGGG ACTGAGCCTC TCGGTCGCGG CGGGCGAAAT GACCGCGCTG
GTCGGCGAGA GCGGCTCGGG CAAGACGATC GCCGCACTCG GCATGATCGG CCTGCTGCCG
CGCCGGGCGG AAGCTACCGG CCGGGTCCTG CTGGCCGGCA CCGATCTACT GACACTTCCG
CGGGAAAAAA TGCGACGGGT GCGCGGCGGC GAGATCGGGA TGGTGTTCCA GAATCCGCTC
GCCGCCCTCA ACCCGGCGAT GCGGGTGGGC AGGCAGGTCG AGGAAGTCTA CCGCCTTCAT
ACCGGCGCCG GGCCGGATGC CGCGCGGGCG CAGGCGCGGG CGCTCTTCGA CGAGGTCGGG
ATTCCGCGCG GCGCCGAGCG GCTGGACGAT TTCCCGCACC AGTTCTCGGG CGGGATGCGG
CAGCGGGTGA TGATCGCGAT GGCGCTGGCC TGTGGTCCGA GGCTCCTGAT CGCCGACGAG
CCGACCACCG GGCTTGATGC GCTGGTCGCA CGGCAGATCC TAGCGCTGAT CACGCGACTG
TGCCGGGAAC GGGGCATGGG CGTGCTGTTC ATCACGCACG ACCTCTCGAT CGTCGAGGCG
CATGCAGCGC GGGTGACCGT GCTCTATGCC GGGCGGGCGG TGGAATGGGG CCGCGCCGCC
GACCTGTTCG CGACGCCGCG CCACCCCTAC ACACGCGCCC TGCTCGGTGC GGTACCGGGG
CCTGAGCAGG CGCGGCTGGT CACCATTCCT GGCACCCTGC CCGATCCAGC GGCATTTCCG
CCGGGTTGCC GGTTCGCTCC GCGCTGCGTC CTGCGCGAGG CCGCCTGCGA GGCAGGGTTT
CCCGCGACGG ATACGCTGGG CGGGACCGCC TTCGCCTGCC GTCGCGGCCG CGAGCCGTCG
CCGGTGCCGG AACGGAACAC GACGCGCGTT GCCCCACAGG TGGAGGCGGC AGGCGAGCCG
GTTCTGGAGG TTTCGGAACT GCGCGTCGAA TATGACCGCC GCCGATCGGA CTTCGCTTTC
CGGCGTCCAC CGCCACTTCT CGCCCTCGCC CCGGTTTCCT TTACGCTGCG GCGGGGCGAA
TGCCTCGGCG TGGTTGGCGA GAGCGGATCG GGCAAGTCGA GCCTCGGCCG CGCGGTGCTG
CAGATGCTGG CGCACGAAGG CACGGTACGG CTCGGCGGTG CCGACCTCGA GAGGATGCGC
GGCAAGGCGC TTGCCGCGGC AAGGCGGCGC ATCCAGGCGG TATTCCAGGA TCCGCGCGAG
TCGATGAACC CGCGTATGCG GATCGGCGAC ATCGTGGCCG AGCCGCTGCG CCTCGCTGGC
GTCCGCAAGC ACGAGAGACG CGCGCAGGCC GCGGCGTTGC TCGACCGGGT CGGGCTCGGC
GCGCGCCTGT TCGACCTGTT GCCCGGCCAG GTCTCGGGCG GCGAGGCCCA GCGCGTGGCG
ATCGCCCGCG CGCTGGTGGC GGCGCCGGAT GTCATCGTGC TTGATGAACC GACGTCGAGC
CTCGATGTGT CGACCCAGGC GCTGCTGCTC AACCTGCTGA AAGACCTCGC AAGTGATGAG
GGGCTCTCCT ACATCCTGAT CAGCCACGAT ATCGCGACGG TGTTCCACAT GGCCGACCGC
CTGCTCGTGC TGCGGGAAGG CCACGTCATC GAGGCCGGGG TCGCGGGGGA TTTACTTGCC
GGTGCGAAAT CCGACTATAC GAAGGAACTG ATCGCTGCCG GCGCGTCCGC GCGCTGGCGC
GGGCCCGAAC ACACCGAGGA GCTTAGCTCA TGA
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| Protein sequence | MSPVLDLDRL SVTLRRRDGT RLALLEGLSL SVAAGEMTAL VGESGSGKTI AALGMIGLLP
RRAEATGRVL LAGTDLLTLP REKMRRVRGG EIGMVFQNPL AALNPAMRVG RQVEEVYRLH
TGAGPDAARA QARALFDEVG IPRGAERLDD FPHQFSGGMR QRVMIAMALA CGPRLLIADE
PTTGLDALVA RQILALITRL CRERGMGVLF ITHDLSIVEA HAARVTVLYA GRAVEWGRAA
DLFATPRHPY TRALLGAVPG PEQARLVTIP GTLPDPAAFP PGCRFAPRCV LREAACEAGF
PATDTLGGTA FACRRGREPS PVPERNTTRV APQVEAAGEP VLEVSELRVE YDRRRSDFAF
RRPPPLLALA PVSFTLRRGE CLGVVGESGS GKSSLGRAVL QMLAHEGTVR LGGADLERMR
GKALAAARRR IQAVFQDPRE SMNPRMRIGD IVAEPLRLAG VRKHERRAQA AALLDRVGLG
ARLFDLLPGQ VSGGEAQRVA IARALVAAPD VIVLDEPTSS LDVSTQALLL NLLKDLASDE
GLSYILISHD IATVFHMADR LLVLREGHVI EAGVAGDLLA GAKSDYTKEL IAAGASARWR
GPEHTEELSS
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