Gene Acry_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_1138 
Symbol 
ID5162414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp1267534 
End bp1268520 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID640553052 
Productinner-membrane translocator 
Protein accessionYP_001234269 
Protein GI148260142 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGCGC CCGGCAAGAC GGCGCGCATC GGGACAGGCC CGGCGCCGTT CGCCGCCCGC 
CTCGGGCCGG CGGCGCGGCG CATGCTGCTG TCCTACCTGA TCCTCCTTCT CGTTTATGGC
TGCGCCGTCG CGGTGAATCC CGAATTCCTC GGCTGGGGCA CCATGCGGCT GCAACTCGTG
CAGGCGACGT TCATCGGCCT GATCGCGATC GGCGAGACCT TCGCCATCCT GATCGGCCAG
ATCGACCTTT CGGTGCCGTG GACCATCACC CTCTCGGCCA TCCTGAGCAC CAATCTCGCG
GCGGTGTACG GCCATCAGTG GATCGCCTTC GCCATCGTCA TCGCGGTCGG CGTCGCGGTG
GGGCTGCTGA ACACGCTCGG CGTGTTCGTG CTGCGGGTGC ATTCGCTGAT CTGGACGCTC
AGCGTCAACC TGCTGCTCCA GGGCATTGCC CTCGTCTACA CGAACGCCGT CGCGCCGACG
ACCCATATCC CCGGCGCCGC CCGCACGCTC GCGCTCGGCA ATGTGGGGTT CATGCCGGCG
GCGTTCCTCG TCTGGATCGT CTGCGGCGCG ACTTCCATCC TGGCCCTGCG GGCGATGCCG
TTCGGCCGCT CGATCTATGC GATCGGCAAC AGCCCGGCGG CGGCCCTGCT CTCCGGCGTG
CCGATCGGAC GGGTGACGGC ACTGATCTTC GTCATCAGCG CGACATGCGC CGCCTTCGTC
GGGCTGCTGC TGAGCGGATA TTCGTCGCAG GCCTATCTCG GCATGGGCAA CGACTATCTG
CTCCCGCCGA TCGCCGCCGT CGTCATCGGC GGCACCCGGC TGTCAGGCGG CGAGGGGGGC
TATGCCGGCA GCATCGCCGG CGCGCTGACC GTCGTCCTGC TGCAGGCGAT CCTGGTGACG
CTGAACATTT CCGAAGGCGC GCGCCAGCTC GTCTTCGGCG CCATCCTGCT GGCGCTGGCA
TTGCTGTTCC TCAAGCGGCG GTCATAG
 
Protein sequence
MTAPGKTARI GTGPAPFAAR LGPAARRMLL SYLILLLVYG CAVAVNPEFL GWGTMRLQLV 
QATFIGLIAI GETFAILIGQ IDLSVPWTIT LSAILSTNLA AVYGHQWIAF AIVIAVGVAV
GLLNTLGVFV LRVHSLIWTL SVNLLLQGIA LVYTNAVAPT THIPGAARTL ALGNVGFMPA
AFLVWIVCGA TSILALRAMP FGRSIYAIGN SPAAALLSGV PIGRVTALIF VISATCAAFV
GLLLSGYSSQ AYLGMGNDYL LPPIAAVVIG GTRLSGGEGG YAGSIAGALT VVLLQAILVT
LNISEGARQL VFGAILLALA LLFLKRRS