| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1068 |
|---|
| Symbol | |
|---|
| ID | 5159843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 1191679 |
|---|
| End bp | 1193070 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640552986 |
|---|
| Product | type III effector Hrp-dependent outer protein |
|---|
| Protein accession | YP_001234203 |
|---|
| Protein GI | 148260076 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGACCCCGC GCGGCGACAG GCTGATCGGC TTCTACGGCG ACGATTATAC CGGTTCGTCG
GCGGTGATGG AGGTGCTCGG CTTCGCCGGC GTGCCCACCG TGCTGTTCCT CGAACCGCCC
GACGAGGCCG CCCTCGCCCG CTTCGCCGAT TGCCGCGCCG TCGGCATCGC CGGCATCGCC
CGCTCGCAGA CGCCGGCCTG GATGGACGCG AACCTTCCCG GCATCTTCGA CACCCTCGCC
CGCATCGGCG CGCCGGTCAC CCATTACAAG GTCTGCTCGA CCTTCGACTC CGCGCCGCAA
ATCGGCTCGA TCGGCCGGGC GATCGAACTC GGCGTCCCGC GCCTCGGCGG CGCCTGGCAC
CCGCTGCTCG TCGCCGCCCC CGCGCTCGGC CGCTACCAGG CCTTCGGCAA TCTCTTCGCC
GTCGCCGGCG GCGCGGTCCA CCGGCTCGAC CGGCACCCGA CCATGTCCCG CCATCCCGTC
ACCCCGATGG ACGAGGCCGA TCTCCGCCGT CACCTCGCCC GCCAGATCGC GGCGCCGATG
GGGCTGGTCG ACCTCGTCGC CCTGCAAGGC GGACGAGCCG ACGCGGCGCT GGCCGCCTGC
CTCGACGCCG GCGAGCGGAT CGTCTCGCTC GATGCCATCG ACGAGGCCAC GATCGCGGAA
GCCGGCCGGC TGATCTGGGA GCATCGGGGC GAGCGCCTCT TCGCGATCGG CTCGCAGGGC
GTCGAATACG CCCTCGTCGC GCACTGGCGG CGGATCGGCC TGCTGGCGCC GGAGGCCGAG
CCCGCATCCG CCCCGCCGGT CAAGCGCATC GCCGTCGTCT CCGCCTCCTG CGCGCCGGTC
ACCGCCGCGC AGATCGCGCA GGCGCGGCGC GACGGCTTCA CTACCTTCGC GGTCGATGCC
GCCGCCGCCG CCGACCCCGC CCTCTGGGCG CGGGAACTCG ACCGCGCCGA GCGGGACGGC
CTCGCCGCCC TGCGCGAGGG GCGCAGCGTC GTGCTGCACA CCGCCGAGGG GCCGGACGAT
CCGGCCATCA TCCGCACCCG TGCGGCCATC GCGGCGGCGG GCGAACCCGC CGAAACCATC
CATGCCCGGA TCGGCGCCGG GCTCGGCCGG TTGCTCGGCC GCCTCGCCGC GCAATCGGGC
CTCACCCGCG GCGTGATCGC GGGCGGCGAT ACGTCGGGCC ACGCGGCGCA GGCGCTGGGC
ATCGGCGCGC TGACCGCCCT CGCCCCGCTC GCGCCGGGCG CGCCGCTCTG CCGCCTGCAC
GGCAGCGCGC GGGCCGGCGG CCTCGCGGAA ATCGTGCTCA AGGGCGGCCA GATGGGCGGC
CCCGACTTCT TTCAAACGGT CCTGCGCGGC GGTCATGCCG CGACGGGCGA GATCAGGAGA
CAAGACGCAT GA
|
|---|
| Protein sequence | MTPRGDRLIG FYGDDYTGSS AVMEVLGFAG VPTVLFLEPP DEAALARFAD CRAVGIAGIA
RSQTPAWMDA NLPGIFDTLA RIGAPVTHYK VCSTFDSAPQ IGSIGRAIEL GVPRLGGAWH
PLLVAAPALG RYQAFGNLFA VAGGAVHRLD RHPTMSRHPV TPMDEADLRR HLARQIAAPM
GLVDLVALQG GRADAALAAC LDAGERIVSL DAIDEATIAE AGRLIWEHRG ERLFAIGSQG
VEYALVAHWR RIGLLAPEAE PASAPPVKRI AVVSASCAPV TAAQIAQARR DGFTTFAVDA
AAAADPALWA RELDRAERDG LAALREGRSV VLHTAEGPDD PAIIRTRAAI AAAGEPAETI
HARIGAGLGR LLGRLAAQSG LTRGVIAGGD TSGHAAQALG IGALTALAPL APGAPLCRLH
GSARAGGLAE IVLKGGQMGG PDFFQTVLRG GHAATGEIRR QDA
|
|---|
| |