Gene Acry_0664 details

Gene Information

• Locus tag: Acry_0664
• Symbol: rpsD
• ID: 5161679
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 751161
• End bp: 751775
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640552578
• Product: 30S ribosomal protein S4
• Protein accession: YP_001233804
• Protein GI: 148259677
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.359087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGC GTACCGAAAG CAAGTACAAG ATCAACCGCC GCCTTGGCGT GAATCTCTGG 
GGCCGGCCGA AATCCCCGAT CAACAAGCGC GAATACGGCC CCGGCCAGCA TGGCCAGCGC 
CGCAAGAAGC CGTCCGACTT CGGCGTGCAG CTGATGGCGA AGCAGAAGCT TCGCGGCTAT 
TACGGCAATA TCAGCGAGAA GCAGTTCTAC AAGTATTACG AGGAGGCGGT GCGCCGCCGG 
GGCGACACCT CCGAGAACCT GATCGAGCTG CTCGAGCGCC GGCTCGATGC GGTGGTCTAT 
CGCATGAAGT TCGCGATCAC CCCGTTCGCC GCGCGCCAGT TCGTCAGCCA CGGCCACGTT 
CTCGTCAACG GCCGCCGCGT CAACATCTCG TCGTACCAGG TGCGTGACGG CGATGTCGTC 
GAGGTGCGCG AGAAGTCGAA GCAGCTCGCC ATGGTGCTCG ACTCGGTGCA GAGCGCCGAG 
CGCGACGTGC CGGAATATAT CGAGGTCGAC CACCGCGCGA TGAAGGGCAC CTTCGCCCGC 
GCGCCGAAGC TGGCCGACGT TCCCTATCCG GTGCAGATGG AACCCAACCT GGTCGTCGAG 
TTCTACTCGC GCTGA 

 

Protein sequence

MTKRTESKYK INRRLGVNLW GRPKSPINKR EYGPGQHGQR RKKPSDFGVQ LMAKQKLRGY 
YGNISEKQFY KYYEEAVRRR GDTSENLIEL LERRLDAVVY RMKFAITPFA ARQFVSHGHV 
LVNGRRVNIS SYQVRDGDVV EVREKSKQLA MVLDSVQSAE RDVPEYIEVD HRAMKGTFAR 
APKLADVPYP VQMEPNLVVE FYSR