Gene Acry_0417 details

Gene Information

• Locus tag: Acry_0417
• ID: 5160028
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 470842
• End bp: 471462
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640552334
• Product: outer membrane lipoprotein carrier protein LolA
• Protein accession: YP_001233561
• Protein GI: 148259434
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00656484
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCCA GAAGAGCTTT GCTGGGCATT GCCGCAACCT GCGTTGCGGC ATCCTTTTCC 
CCTGCGTGGT CGGCCCCCCT TTCGTCCGGC CACACACAGC AGGTCCTGGG TAAAGTTCTC 
GATTACCTGA ACAGCCTGAA GACCGTCACC GCCCGCTTCA TGCAGGTTGG CCCCGATGGT 
TCCGTCCGAA CCGGCACCGC CATCGTGCAG CGCCCTGGGA AAATGCGGTT CGAATATGAC 
AAGCCGGACC CTCAACTGCT CGTCGCGGGC TTCGGGTTGC TTGTGTATCA CGATCCGCAG 
CTGGACCAGA CAACCAACAT TCCGCTGTCG TCCACGCCTC TCGGCATCCT CCTCGCCAAG 
CACATAACCT TCGGCGGCGA TGTCAAGCTC CTGCGCGTCT CGACGCCACC AGGGGAAATC 
CAGGTCACGC TGACGCGGGC GGGCAGGGAA GCGCAGGGCC ACATCACCCT CGTCTTCTCG 
ACCAATCCGA TCGAGTTGCG GCAATGGCGG CTTACCGACG CTCAAGACCG CGTGACCCAG 
GTCAGCTTGT ACGACCTGAA GCCGGCCGCA CCGTTCCCCG ACAAAACCTT CGAATTCGTT 
CCCGGCTACA ACACGAACTG A 

 

Protein sequence

MIARRALLGI AATCVAASFS PAWSAPLSSG HTQQVLGKVL DYLNSLKTVT ARFMQVGPDG 
SVRTGTAIVQ RPGKMRFEYD KPDPQLLVAG FGLLVYHDPQ LDQTTNIPLS STPLGILLAK 
HITFGGDVKL LRVSTPPGEI QVTLTRAGRE AQGHITLVFS TNPIELRQWR LTDAQDRVTQ 
VSLYDLKPAA PFPDKTFEFV PGYNTN