Gene Acry_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_0250 
Symbol 
ID5160853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand+ 
Start bp287150 
End bp287815 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content72% 
IMG OID640552167 
Productribonuclease III 
Protein accessionYP_001233397 
Protein GI148259270 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGAGG CGGCGGAAGC GCTGCTCGGG CATCGCTTCG CGCGACCTGA CCTGCTCGCC 
CAGGCCCTGA CCCATCGCTC CGCGGTCGGG CAGGGTGGTC TCGGGTCGAA CGAACGGCTG 
GAATTCATCG GCGACCGCGT GCTGGGCCTG CTGATCGCCG AATGGCTGAT CGAGCGCTTC 
CCGCATGAGC GCGAGGGCGG GCTGGGGCCG CGGCTGGCGC ATCTCGTCTC CCGCCAGTCG 
CTGGCGGAAA TCGCCGAGCA TGGCGGGATT GCCGGGCTGC TGTCGGTCTC GCCGGGGGAG 
AGCCGGCGCG GGGTGCGCAA CCGCGCGACC GTGCTGGCCG ATGCGCTGGA AGCGCTGATC 
GGCGCGCTCT ATCTCGATGG CGGGCTGGAG CCGGCGCGGC TGTTCATCCG CCGCATCTTC 
GCGCCCCGGA TCGACGGCCA GCCGAGCGCC CCGCCCAAGG ACCCGAAGAC CGCGCTACAG 
GAATATGCGC TGGCGCGCGG GCCGGTTCTG CCGGCCTATG AGCTGGTGGA GCGGACTGGC 
CCCTCGCACG CGCCGCGCTT TCGCATCCGC GTGACGGTCG CCGGCCGCAC CGCCGAGGGA 
CTTGCCGGAA CCAAGCGCGA GGCGGAGCAG AACGCCGCGC GCGACCTGCT GGAGCAGCTG 
CAATGA
 
Protein sequence
MSEAAEALLG HRFARPDLLA QALTHRSAVG QGGLGSNERL EFIGDRVLGL LIAEWLIERF 
PHEREGGLGP RLAHLVSRQS LAEIAEHGGI AGLLSVSPGE SRRGVRNRAT VLADALEALI 
GALYLDGGLE PARLFIRRIF APRIDGQPSA PPKDPKTALQ EYALARGPVL PAYELVERTG 
PSHAPRFRIR VTVAGRTAEG LAGTKREAEQ NAARDLLEQL Q