| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0119 |
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| Symbol | |
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| ID | 5160669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 131468 |
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| End bp | 132304 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640552035 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001233266 |
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| Protein GI | 148259139 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCG CCGCGAGCAT CGAACACGCT TCTGGCAAGG ACCGCGGTGA CGAGAATTTC
CCGGTCGGCT CTTGGCTGAT TCGCGCCGGG CTGCGCCGGC ACGTGCATGC CTATTACGCG
TTCGCGCGCA ATGCCGACGA CATCGCCGAT CATCCCGATC TTGCTCCGGC GGAAAAGATC
GCCCGCCTCG ATGCAATGGA AGCGGTGCTG GACGGCGACG ATCCGACGCG TTCGCCTTCG
GCGGCACGGC TTCGCGAGAG CCTGGCGGAG ACCAACGTCG ATCCGGTCCA TGCGCGCGAA
TTGCTCGTTG CCTTCCGGCA GGATGCGACC AAGACACGCT ATGCGAGTTG GGACGAGTTG
ATGCGCTATT GTCGCTATTC GGCGGCGCCG GTCGGACGTT ACGTGCTCGA TCTGCACGGC
GAGAGCCGCC AGAGTTGGCC TGCCTCCGAC GCGCTGTGCG CCAGCCTGCA GGTGCTCAAC
CACCTTCAGG ATTGCGCGAA GGATTTCGAC ACCCTCGACC GGTCCTACAT CCCCGGTGAC
TGGTTGCAGG CGGTCGGGCT CGGGCCGGAC GCCGTCACCG CGAAGGCGAC TCCCCCGGCA
CTGCGCTCGG TGTTCGATGC GATGCTGAAA AGGACGGCGG AGTTAAACGC GAAGGCGGCG
CGTCTTCCGG GATTCGTGGT CGCCCGCGGG TTGCGGGTGG AGACGGCGAT CATCGTTGGC
CTCGCCCGCC GGCTGCACCG CCGCCTACTG CGGGAGGATC CGCTGGCCGG GCGCGTGAAG
CTGCGCCGTA ACGACGCCAT CAGCGCCGTA CTCGCCGGCC TTCCACGCCT GCTCTGA
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| Protein sequence | MSAAASIEHA SGKDRGDENF PVGSWLIRAG LRRHVHAYYA FARNADDIAD HPDLAPAEKI
ARLDAMEAVL DGDDPTRSPS AARLRESLAE TNVDPVHARE LLVAFRQDAT KTRYASWDEL
MRYCRYSAAP VGRYVLDLHG ESRQSWPASD ALCASLQVLN HLQDCAKDFD TLDRSYIPGD
WLQAVGLGPD AVTAKATPPA LRSVFDAMLK RTAELNAKAA RLPGFVVARG LRVETAIIVG
LARRLHRRLL REDPLAGRVK LRRNDAISAV LAGLPRLL
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