| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3689 |
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| Symbol | |
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| ID | 5165811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4314910 |
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| End bp | 4317180 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640551174 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001232415 |
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| Protein GI | 148265709 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000324271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGAC ATCTAGTCAT AGTTGAATCT CCGGCCAAGG CCAAGACCAT TGAAAAGTTT
CTCGGTACGG ATTACAAGGT GCTCGCCTCT TTCGGCCATG TCCGGGCGTT GCCCAGCAAG
CAGGGATCGG TGGATATCGA GCATGATTTC GAACCGAAAT ATGCGGTCCT CCCCGAGAGT
AAAAAACATA TCGATGCTAT CAAGAAAGAG TTGAAGAACT CCGATTCCCT GCTCCTGGCG
ACTGACCCCG ACCGTGAAGG GGAGGCGATC TCCTGGCACC TCCTGGCGGC GCTGGGACTG
GATAAAAAGA AGCCGGCCAT CGACATCAAG CGGGTCGTGT TCCATGAGAT TACCAAAGGC
GCCATTATAC ACGCCGTTGA GAATCCTCGC AGCATTTCCC ATGAGCTGGT GGACGCCCAG
CAGGCTCGCT CTGTGCTCGA TTATCTGGTC GGTTTCAATC TTTCGCCGTT TCTCTGGAAA
AAGATTCGCT ACGGCCTATC CGCCGGGCGT GTCCAATCGG TTGCTTTGCG CCTGGTCTGC
GAACGGGAAA AGGAGATCCA GGCCTTCACG GAACAGGAGT ACTGGACCAT TGCCGCCCAG
CTGGCAACCG GTGCGCAGCA GAATGTCACC GCCAACCTGG TGGAAGCTGA GGGACAAAAG
CTCGGCAAAT TCGGCATCCC CGACAAGGCG GCCGCAGAAC GGCTGACGGA AATTCTCGCC
AATGGGAGCT ATCAGGTTGA CAAGGTAACC AGAAGCGAGC GCAAGCGGCA GCCCTCGCCC
CCCTTTACCA CCTCCACCTT GCAGCAGGAG GCGGCGCGCA AACTCGGCTT CTCCGCCAAG
AAGACCATGT CCATTGCCCA GAAGCTCTAC GAGGGAATCG ATGTGGGGGA GGGGACGGTC
GGTCTCATCA CCTATATGCG TACCGACAGC GTGGTTCTCT CCCAGCAGGC CCTCGACGAA
GCCCACGAGG TTATCACCAG CCTCTACGGA AAGGAATATG CCCTGGCGAA GCCGAGGTTC
TTCAAGAACA AGGCGAAAAA CGCCCAGGAG GCCCATGAGG CGATACGCCC CACCTACATC
TGCAAGACCC CCGTTGAGCT GAAAAAGTTT CTCTCTTCGG ACCAGTTCAA GCTCTACGAC
CTGATCTGGA AGCGGACCGT TGCCTGTCAG ATGGCCGAGG CGCTCCTGGA TCAGACCTCG
GTGGACATCG GCGCCGGCGA AGGTTACAAG TTCAGGGCAG CTGGAACCGT GATCCGTTTT
CCCGGCTTCA TGAAGCTCTA CATCGAGGGG GTTGACGACG AGACGGAGGA GAAGGAAGGG
GTGCTGCCGC CGCTCAATGA AGGTGACCCG TTGAAACTTA AGGAATTGCT TCCAGAACAG
CACTTTACCC AGCCGCCTCC CCGCTATACC GAGGCAACCC TGGTCAAGAC CCTTGAGGAA
TACGGCATCG GCCGCCCCTC CACCTATGCC AGCATCATGA ATACGCTCGT GGAGCGTAAA
TATGCCCGTC TCGACAAGAA ACGCTTCTTT CCCGAAGATG TGGGGATGGT GGTCAGCGAA
CTGCTGGTAA ACCATTTTAC CAAGTACGTT GACTACAATT TTACCGCTTC GCTGGAAGAG
GAGCTGGATC GGGTATCGCG AGGTGAAAAG AAATGGAAGC CGCTTCTCCA TGACTTCTGG
GAACCTTTCC AGACGTTGCT CAAGCAGAAG GAAGGAGAGG TCAACAAGTC CGATCTCACC
ACCGAAGCTA CCGACGAGAT CTGCCCGGAG TGCAGCAAGC CTCTGGTGGT AAAACTCGGC
AAGTTCGGCA AGTTTTTTGC CTGTTCCGGC TATCCGGAGT GCAAGTATAT CCGCCCTCTG
GACAAGGACA AGAAAGATGT TGCCGAGCCG GTCATTTCCG AGGAAAAATG CGACAAGTGC
GGCAGCCAGA TGCTGATCAA GGAAGGACGG TTCGGCAAAT ACCTGGCCTG CTCAGCCTAT
CCCGCCTGCA AGAACATCCA GCCGCTGGTC AAGCCGAAGG GGACCGGCAT CAAGTGCGTG
GAGTGCGGCG AGGGGGAATT GACCGAAAAA AAATCCCGCT ACGGCAAGAT GTTCTATTCC
TGCAACCGTT ATCCCCAGTG CAAGTTCGCC CTCTGGGACC TCCCCGTGGA AAAGCCCTGC
CCCAAGTGCG GTTTTCCGCT CCTGGTGAAG AAGGTTTACA AGCGGGAAGG GGAGTTCCTC
AAATGCCCGA AAGAGGGGTG CGATTACAAG GAAGGCGGGA AAGAGAAGTA A
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| Protein sequence | MPRHLVIVES PAKAKTIEKF LGTDYKVLAS FGHVRALPSK QGSVDIEHDF EPKYAVLPES
KKHIDAIKKE LKNSDSLLLA TDPDREGEAI SWHLLAALGL DKKKPAIDIK RVVFHEITKG
AIIHAVENPR SISHELVDAQ QARSVLDYLV GFNLSPFLWK KIRYGLSAGR VQSVALRLVC
EREKEIQAFT EQEYWTIAAQ LATGAQQNVT ANLVEAEGQK LGKFGIPDKA AAERLTEILA
NGSYQVDKVT RSERKRQPSP PFTTSTLQQE AARKLGFSAK KTMSIAQKLY EGIDVGEGTV
GLITYMRTDS VVLSQQALDE AHEVITSLYG KEYALAKPRF FKNKAKNAQE AHEAIRPTYI
CKTPVELKKF LSSDQFKLYD LIWKRTVACQ MAEALLDQTS VDIGAGEGYK FRAAGTVIRF
PGFMKLYIEG VDDETEEKEG VLPPLNEGDP LKLKELLPEQ HFTQPPPRYT EATLVKTLEE
YGIGRPSTYA SIMNTLVERK YARLDKKRFF PEDVGMVVSE LLVNHFTKYV DYNFTASLEE
ELDRVSRGEK KWKPLLHDFW EPFQTLLKQK EGEVNKSDLT TEATDEICPE CSKPLVVKLG
KFGKFFACSG YPECKYIRPL DKDKKDVAEP VISEEKCDKC GSQMLIKEGR FGKYLACSAY
PACKNIQPLV KPKGTGIKCV ECGEGELTEK KSRYGKMFYS CNRYPQCKFA LWDLPVEKPC
PKCGFPLLVK KVYKREGEFL KCPKEGCDYK EGGKEK
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