| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3466 |
|---|
| Symbol | |
|---|
| ID | 5163820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4072541 |
|---|
| End bp | 4075714 |
|---|
| Gene Length | 3174 bp |
|---|
| Protein Length | 1057 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640550953 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001232195 |
|---|
| Protein GI | 148265489 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3696] Putative silver efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGTT GGATCATTGG ATCGAGCTTG AAGCTTCGAC TCGTGGTGGC TGCACTCGCG
GTGTTGCTGA TGGTTTTCGG CTTCTCTCAG CTTGGAGAGC TTGAGGAGCT ACCGGTGGAT
GTCTTGCCCG AATTCTCACG GCCGCATGTG GAGGTTCAAA CCGAGGCCCT GGGTCTGTCT
GCCGAGGAAA TTGAAGCGTT GATAACCACT CCCATGGAGG CGGATTTGCT CAACGGGGTG
TCGTGGGTGA AGGAGATCCG CTCCGAGTCA ATTCCCGGCC TGTCGTCCAT CGTTCTCATC
TTCGAGAAAG GCACCGACGT CATGCGTGCC CGGCAAATGG TGCAGGAGCG GCTGATCGGG
GTGTATGTGT TGCCGAACGT GGCGACGCCG CCTACCATGA TCAATCCCCT ATCCTCGGTC
AGCCGGTGCA TGGAGATCGG GCTGACCTCG AAAACAATGT CCCTGATTGA TATGTCGGTG
CTCGCCCGTT GGACGATCAA GCCCCGCTTG ATGGGCGTAC CCGGCGTGGC GAATGTGTCG
ATTTGGGGCC AGCGGGAGCG GCAGTTGCAG GTGCAGGTCG ATCCGAAAAG GTTGCGGGAT
GAAGGCGTTT CGCTGATGCA AGTCATCAGA ACCACAGGCA ATGCGCTGTG GGTGTCCCCC
TTGACCTTTC TGGAAGCATC GACACCCGGC ACCGGGGGGT GGATCGATAC CCCCAATCAA
AGGCTCGGAG TCCGACACGT CCTGCCCATT AAAACGGCGG AGGACCTGGG CCGGGTGACC
ATCGAGGACG CGCCATCGAA GGACCTGCAT GATGTAGCCA CAGTGGTGGA AGACCATCAA
CCGCTCATCG GTGATGCCAT CGTTGACGAC GCCCCGGCGC TCATGTTGGT CGTTGAGAAA
TTTCCATGGG CCAATACGCT GGAAGTGACT CAGGAGGTGG AAGAGGCGCT GGCGGCCTTA
CGGCCCGGAC TATCCGGGTT GGAGATGAAC TCCTCCCTCT TTCGACCGGC GACCTTCCTT
GAGTTGGCGG TCAGGAATCT CTCCACGGCT CTGCTCATCG GTGCCGTTCT CATAATTGTG
GCGCTCTTTG CCTTTTTTTT CAACTGGCGT ACCGCGCTGA TCAGCATCGT GGCACTCCTG
GTGTCTGTGT TCGCAGCCGG GACCGTGCTC TACGCATGCT GGGCAAAATT CAACATGCTG
GTTATCGCCG GGCTGATAGT AACCCTCGGC GTCATCATCG ACGACGCGAT CGTCGACACG
GAAAATATCG TACGGCGTCT CCGACAGGCC CGAGAAGAGA ACAACGGCAA ATCAACTGCG
GCCATCATTT TCGAGGCTGC GGTCGAGATG CGCAGCCCCA TCATCTACGC GACGCTGATC
GCAGTGCTGG CGTTGATACC GCTTTTGTTC CTGGAAGGCG TGTCCGGCGC ATTCTGGAAG
CCCATCGCCA TCTCTTACAT GCTGGCGATG CTCGCCTCCA CGGCGGTTGC CATGACCGTC
ACGCCGGCGT TGAGTCTGCT GTTCTTGCGT AAAGACTCGC TCCAGAGGGG CGATTCTCCG
GTCATGGCGA TGCTGCGCCG TATCCACAGC GCCATTTTCG GGTGGGCCGG CCGCACTCCG
CGCCTGGCAT TCGTCGCTGT TTGCGCCGTC CTCGTTGCCG GACTCGTCTC CATACCATTC
CTCCGTCAGG AATCACTGCT GCCGGACTTC AAGGAAACGG ATCTCGTGAT TCGGTGGGAA
GGTGGTTCCG GCGCATCTCT TCCGGCAATG AGCCGGATCA CGACTCTGGC CAGCCGCGAA
CTGCGCTCCA TTCCAGGGAT CCGCAACGTC AGTGCCCATG AGGGGCGCGC CATCATGTCG
GATAAGCGCG CGGGAATCAA CTCCGGTGAA CTTTGGATCA GCATCGATCC TGCCGCCGAC
TATGACGCGA CAGTGGCCTC GGTAAAAGAA GCGGTCGCAG GCTACCCCGG TCTGTCTCCT
GAAGTACTGA CCTACCTGGA AGCGAAAGTC AGAGAGGAGC TGCCGGGGAC GGGCGAATCC
TTCATTGTGC GCGTTTACGG CGAGGACATG AAGATGATCC GCTCCAAGGC GGAAGAGATA
CAGAAAGTCC TGGCGGGGAT CAACGGAATC GTTGATGCAA AAGTGCAGTA TCCAAAGGAA
GAGCCGACTC TGGAAATCGA AGTAGATCTT GAGAAAGCGA AACGCTACGG CCTCAAACCC
GGCGATGTGC GACGCGCGGC GACCACATTG GCGTCAGGCC TTTTAGTCGG CAACCTTTTC
GAGGAACAGA AGGTATTCGA AGTGGTGGTG CTGGGCACGC CCGAAACCCG CCGCAGCGTG
AACAGTATTA AAGATCTTCT GATAGACACG CCCGGGGGGG GGCACGTGCG TTTGCAGGAA
GTGGCCAACG TGCGCATTAC GCCGGCTGCC ACCGTCATCA ATCGAGATGC CGTTGCGCGC
CGCATGGACG TAACCGCCAG CGTGCATGGA CGCAATCCCG CCACTGTCGC GGCCGACGTC
AACCGCGGCA TTCAGCAGGT CAGCTTCCCG CTTGAGTACC GCGCGGAACT GTTAGGGGAG
TATGCGGAGC GCCTCGCTGC CCGAGAGCGT GTGTTCGCCT TTGCAATTGC CGCTGCCATC
GGGATTTTCC TGCTCCTGCA GGCCTTCTTC CTGAGCTGGC GCCTGGCGAC AGTCGTCTTC
CTGACCCTGC CGATGGCCCT GATGGGGGGT GTGCTGGCAG CGTTCCTGAG CGGCGGCCTT
ATCTCGCTCG GTTCGATCAT CGGCTTTTTC GCGGTATTGG GAATTGCCGT GCGCAACTGT
ATTTCGCTGG TCAGCCGCTA TCGCCATCTC GATCGCCATG AAGACGAACC CGTCAGCGCC
GACCTGGTCC AGCGCGGCAC CAGCGAACGG TCCGGCACGA TCTTGATGGC TGCGGCAACA
ACAGCATTGG CGTTCTCCCC CTTGGCACTA TTCGGCAATA TTGCCGGCCT CGAAATTGTG
CAGCCGATGG CCATCGTCGT TCTGGGCGGC CTGGTCACGA CGACATTTTT CACCCTGGCC
GGTGTGCCCG CCATCTACTT GTTGTTTGGC ACCAAGCGCG AACCCGATCT TGAGCTGGAA
GTGCGTGAGG CCATCCCGAA CGGTCAAGGG GTGGAGGAAG TCGTGCCGAA GTAG
|
|---|
| Protein sequence | MIRWIIGSSL KLRLVVAALA VLLMVFGFSQ LGELEELPVD VLPEFSRPHV EVQTEALGLS
AEEIEALITT PMEADLLNGV SWVKEIRSES IPGLSSIVLI FEKGTDVMRA RQMVQERLIG
VYVLPNVATP PTMINPLSSV SRCMEIGLTS KTMSLIDMSV LARWTIKPRL MGVPGVANVS
IWGQRERQLQ VQVDPKRLRD EGVSLMQVIR TTGNALWVSP LTFLEASTPG TGGWIDTPNQ
RLGVRHVLPI KTAEDLGRVT IEDAPSKDLH DVATVVEDHQ PLIGDAIVDD APALMLVVEK
FPWANTLEVT QEVEEALAAL RPGLSGLEMN SSLFRPATFL ELAVRNLSTA LLIGAVLIIV
ALFAFFFNWR TALISIVALL VSVFAAGTVL YACWAKFNML VIAGLIVTLG VIIDDAIVDT
ENIVRRLRQA REENNGKSTA AIIFEAAVEM RSPIIYATLI AVLALIPLLF LEGVSGAFWK
PIAISYMLAM LASTAVAMTV TPALSLLFLR KDSLQRGDSP VMAMLRRIHS AIFGWAGRTP
RLAFVAVCAV LVAGLVSIPF LRQESLLPDF KETDLVIRWE GGSGASLPAM SRITTLASRE
LRSIPGIRNV SAHEGRAIMS DKRAGINSGE LWISIDPAAD YDATVASVKE AVAGYPGLSP
EVLTYLEAKV REELPGTGES FIVRVYGEDM KMIRSKAEEI QKVLAGINGI VDAKVQYPKE
EPTLEIEVDL EKAKRYGLKP GDVRRAATTL ASGLLVGNLF EEQKVFEVVV LGTPETRRSV
NSIKDLLIDT PGGGHVRLQE VANVRITPAA TVINRDAVAR RMDVTASVHG RNPATVAADV
NRGIQQVSFP LEYRAELLGE YAERLAARER VFAFAIAAAI GIFLLLQAFF LSWRLATVVF
LTLPMALMGG VLAAFLSGGL ISLGSIIGFF AVLGIAVRNC ISLVSRYRHL DRHEDEPVSA
DLVQRGTSER SGTILMAAAT TALAFSPLAL FGNIAGLEIV QPMAIVVLGG LVTTTFFTLA
GVPAIYLLFG TKREPDLELE VREAIPNGQG VEEVVPK
|
|---|
| |