Gene Gura_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3454 
Symbol 
ID5163323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4061720 
End bp4062505 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content56% 
IMG OID640550941 
ProductKu domain-containing protein 
Protein accessionYP_001232183 
Protein GI148265477 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTAC AGGGAATATG GAGCGGGACG ATCAGTTTCA GCCTGGTGGC AATTCCGGTA 
CAGTTGGTGA AGGCCGTTGC AATCGGCCGG GTCTCTTTTC GCCTGCTCCA CGATAAGGAT
TACTCTCCCC TCGCAAGAAG GATGTTCTGC CCGGAACAGG AAAAGATGGT CCCCCCGGAT
GAGATCATCA GGGGATACGA AATCGGGCCC GACAGGTACC TGCCGATAAC GGACGAGGAA
CTGGAATCCG TGTCGCCCGA ACGGAGTCGC ACGATCGAGA TCGTTGAGTT CATCGACATG
AATGAAGTGG ATCCGATCTA TTACGATCAC CCGTATTATC TCGTTCCTTT GAAGGGGGGC
GAAAAAGCTT ACCGGCTGCT GGTGGAGGTG ATGCGCCGGA CAAACAAGGC CGGGCTCGCA
AAATTCGTTC TGGCCGAGCG TGAGTATCTC GTGGCGGTCA AAAGCACGGA GGGGGCACTG
ACCCTGATCA CGCTCCATTA CAGCGACGAA GTACTTTCCG ATGAAGACAT CGCGCCGAAA
GAAGGAAAGA TCGCGGCCGA AGTTAAAAGC GGCATCAAGA AAAGCATCAA GAACATGATG
GCCGACTTTA ACCCGGGGAA ATATGCGGAC GAGCGCCGGG ACAAGGTCAT GGATCTCCTG
AAGAAGAAGG TGAAGGAAAA AGCGCCGGTT GCGGCCCCTG AAGTGGAGAA AGCAGAGGGA
GAAGGCCCGG CCGACCTGAT CGCCGCGCTG GAGGAGATCA TGCGCGAAGT GAAGAAGAAC
CGGTGA
 
Protein sequence
MAVQGIWSGT ISFSLVAIPV QLVKAVAIGR VSFRLLHDKD YSPLARRMFC PEQEKMVPPD 
EIIRGYEIGP DRYLPITDEE LESVSPERSR TIEIVEFIDM NEVDPIYYDH PYYLVPLKGG
EKAYRLLVEV MRRTNKAGLA KFVLAEREYL VAVKSTEGAL TLITLHYSDE VLSDEDIAPK
EGKIAAEVKS GIKKSIKNMM ADFNPGKYAD ERRDKVMDLL KKKVKEKAPV AAPEVEKAEG
EGPADLIAAL EEIMREVKKN R