| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3305 |
|---|
| Symbol | |
|---|
| ID | 5166787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3884285 |
|---|
| End bp | 3886099 |
|---|
| Gene Length | 1815 bp |
|---|
| Protein Length | 604 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640550791 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001232035 |
|---|
| Protein GI | 148265329 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.153336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATC GTTGCACATT GAGAAAGGTT TTTTGTATGG TGGCGGCACT CGGTACGTTT
GCTGTTGCAG GTTGCGGCGG AGGAGGAGGC GTCAGTGGCG GCGTCAGTGG CGGATCCACC
TCCGTCAGTG GCGTGGTTGC TGATGGTTAC CTGGAAAAGG CCACGGTATT CCTGGATCTG
AACGATGATA AGCAGTTAAC TGCGGGGGAG CCGACTGCCG TTACCAAGGC TGACGGAACT
TACACACTGG AAAACGTTAC TGCTGCAGAT TTGAAAGCAC ACGCGATTGT AGTCATTGCG
GAAAAAACCG TCACCATCAA CCATGAGGGG AATACCAGCA CTCCGGTGGC GGACAAGTAT
ATACTTTCAA CCCCCCCGGA TGCACCCAAA AACCCCGAAG GCAAGGTGGT CATTACCCCG
CTTACCACGC TCATTCACAA CCAGATCGAA ACAAACCCGG TCTTGAAAGT CGCAGAAGCT
GAAGCTGTTG TAAAGTCCAA CCTCGGGGTA GCCACAGCGA CAAGCCTGTT TGAGGATTTC
GTCCAGAAGA AAGGGGCCAG TGCCGACTAC GACAAGGTGA GCAAGGTCGC CCAGGTGGTG
GCGACCGCCA TCGGCAACAA CATGACTGCG ATTAAGGCAG CGGCACCGAC CGCCAATCTG
AATGACGTTA TCAAGGTAAT CGTTGCCGAA GTCGTCAATC AGCTGACCAC CATTGCCAAT
ACGGTGGACA CGACATCGAC ATCGAATTTT AATGCGGCTA CCATCGCTAC GACTACGGTC
AACGTCGACA CGACCAATTC CACCACCTTG CAGCAGAACC TCACACAGGC CAGCGCCCCG
GCTGCGGTCA GCTCTTTCCA GACGGCCCTC GGCACCGACG GCTTTTTCTG GATAGACCGG
CGGAACGACA ACATGCAGTC CGTCTATTAT GAATACGGGG TGGTAAAACT GGGCGCGCTT
GGCGCCAGCG GTTATGCGCT GACCGAGGAT TATTTCGTCT ACACCGCCCT CAACCCGACC
TGGGCTGTCG TCACCAGGAA CGACAACAGT TACGTCCTCT CCAAAGACGG CTGGAAGCTG
GCCAACGACA ACGCATCGGC AGGGACGCTG GTCTTTAACG CCGACGGTAC TGCCACCTGG
ACGATAACCG CCAGCGGCGA AAGCGAGGTA ATCACCGTCA GCAAGATCAA CGTAGCCGGC
AAGTTGATCG GCCCTTTTAT CACCAAGGAT AATGCTCCCT TTAATGCCGA TGCGGCATTC
CCTGCGGGCG CCGAGGCCTA TAAAATGACC TTCGTTCCCA AGAGTGACCG CTACTCGATC
TGGGCGGGCA ATGACTCCAA CACTTCGCTG ATGGCGATTA AAACCGTGTC GGACATGCCT
TCCACTTTTG CCGTAGGGGG CACAGGGATG GGGCTTTATA TCGGCAGGGA TTTCTCCGTG
AAGTTCACCG GCACAGGCAC CAGCGGCGCA GCCCAGTTCT ATGTCGGTCA ACAGCAACAG
TTGCTGGCCA TAACCGGTGC CTGGAAGATC GTCGAGCCGG TGGCCGGCTA CCAGGTGTTC
GTCCTCGACG TGCCGTTCGC CTACAAGGCC CAGTACATGT ATGACAACCC GTCCAGGGGG
GTGATCTTCG CCTCTGTCAA CGGCGCGGTC AAGCAGGGGA GTGTGGAGTA CGCCAACGTG
CCGAGGATGG ACGGCGGTCT CAACTTCAAC AAAATCGCAT TCGATGCAAT CAATGCCAAT
TTCACGCCTA CATGGTCATC TCCGGTGGTG AGCCCGGTCC TGCCGGCCGC CAAAAGGGTT
GCCCGCAAAA TGTAA
|
|---|
| Protein sequence | MIDRCTLRKV FCMVAALGTF AVAGCGGGGG VSGGVSGGST SVSGVVADGY LEKATVFLDL
NDDKQLTAGE PTAVTKADGT YTLENVTAAD LKAHAIVVIA EKTVTINHEG NTSTPVADKY
ILSTPPDAPK NPEGKVVITP LTTLIHNQIE TNPVLKVAEA EAVVKSNLGV ATATSLFEDF
VQKKGASADY DKVSKVAQVV ATAIGNNMTA IKAAAPTANL NDVIKVIVAE VVNQLTTIAN
TVDTTSTSNF NAATIATTTV NVDTTNSTTL QQNLTQASAP AAVSSFQTAL GTDGFFWIDR
RNDNMQSVYY EYGVVKLGAL GASGYALTED YFVYTALNPT WAVVTRNDNS YVLSKDGWKL
ANDNASAGTL VFNADGTATW TITASGESEV ITVSKINVAG KLIGPFITKD NAPFNADAAF
PAGAEAYKMT FVPKSDRYSI WAGNDSNTSL MAIKTVSDMP STFAVGGTGM GLYIGRDFSV
KFTGTGTSGA AQFYVGQQQQ LLAITGAWKI VEPVAGYQVF VLDVPFAYKA QYMYDNPSRG
VIFASVNGAV KQGSVEYANV PRMDGGLNFN KIAFDAINAN FTPTWSSPVV SPVLPAAKRV
ARKM
|
|---|
| |