Gene Gura_2542 details

Gene Information

• Locus tag: Gura_2542
• ID: 5166420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 2930502
• End bp: 2932415
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640550038
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_001231293
• Protein GI: 148264587
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0784] FOG: CheY-like receiver; [COG2208] Serine phosphatase RsbU, regulator of sigma subunit
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACAC CGCTCCGAGT TTTAATAGTT GATTTCTCTG AAGACGATGT CGGACTTTTG 
GTCAGGGCAC TTCAAGCCTG TGGCTATGAT CCGGCATATG ATGTGGTTGA AACGTATGCG 
GCGATGAAGG AAGCAATCGT CAACCACTCA TGGGACGTTG TCATTTCAAA ATACGCCCTC 
CCCTTCTTCA ACGCCCGCTC AGCCTTGTCC TTATGCAGGG AAATCAATCA GGACCTGCCG 
TTCATGATTA TCTCCGATTC GACCGACGAA TATACGGCAG CCCAGGCCAT GACACCCGCA 
GCCAACGATT ATTTCCTGAA AGCGTATCTG ACACGATTGG TCCCGGCCGT TAAACGGGAA 
CTGCAGGAGG CTGAGGAACG GCGCAAACGG AGGGATGCGG AAGAGGCCCT CGTCCGGAGT 
GAGCATAGGT ACAAGCGGCT TGTCGCGGCA GTCACAGACT ACATTTACAC CGTCAAAATC 
GAGAATGGGC AGGTGAGCAG TACTTCGCAT GGGCCGGGTT GTGTGACGGT AACCGGCTAT 
ACTCCTGAGG AATACCATGA TAACCAGCAT CTCTGGTATC AGATGATTCT CGAAGATGAC 
CGTCAGAGGG TGATGGAGCA TGCCGGCGCG CTCCTTTCGG GCATGGATGT TCCGTCCATC 
GAGCATCGCA TTATCCATAA GGATGACTCA ATCCGCTGGG TAAAGAACAC CATCGTTCCA 
CGACACAACG AACTGGGCTC ACTTGTTGGA TACGATGGCC TTATTTCAGA CATCACCGAA 
CGCAAGCAGG CTGAAACGTC TCTCCGTCTC CAGAGCGCAG CATTGGAAGC CGCAGCCAAC 
GCCATTGTCA TAACCGATCA CACTGGCGAC ATCATCTGGG TAAATCCGGC TTTTACCCTG 
CTCACAGGTT ATTGCCAGGA AGAAGTCGTC CACCAGAATC TTCGTTTTCT CAAATCCGGC 
AAACATGATG ACGGGTTCTA TCGGCACCTG TGGGAAACAA TCAATAGCGG CATGGTCTGG 
CACGGCGAAA CAACAAACCG GCACAAAAGC GGCTATTATT ACCTGGAGGA ACAGACCATT 
ACTCCCGTAA TGGATGAAAG AGGGAAAATA TGTCATTTTG TTGCCGTAAA ACAGAACATT 
ACAGAACGTA AGCTGGCGGA AAAGGCCCTT TTGGAGAACA TCCAGATGTC ACGGGAGATG 
GAAATCGCCA AGCGGATACA GCTTTCCCTC CTGCCGGCAT TTCCTCCCAA GCTGTACGGT 
GTCCAGTGCG CCAGCCGATG TGTGCCGGCC ACCCACGTTG GTGGTGATTA CTATGATTTT 
TTCCACCACA GTGAAAACAG CATTGACATG GTTATTGCCG ACGTTTCCGG GCACAGTGTC 
GGTGCAGCAC TTATAATGGC TGAAACACGC AGTGCTTTGC GGGTACAGGT CAATGCCGCC 
AATTCGACGA CTACGATCCT GTCCGACCTC AATGATCTTC TATTCGAAGA TCTGAGCAAG 
GCGGAACTTT TCATCAGCAT GTTTTACATC AAATACAATT CCCTCAAACG TCAGCTCACC 
TATTCCAATG CAGGGCACAA TCCCCCCTTG CTGTTCCGCC CAAGCGAAAT GTCTTTCACC 
GAACTTGACG CGGAAGGATT GATCCTCGGG GTACAACGAG ACGTTGATTT TGAGGAAAAG 
AATATCCAGC TTTACGTAGG GGACCTTTTG GTACTCTATA CAGACGGCAT TGTTGAAGCG 
CGAAATGCAA CCGGCGATTT CTTCGGCCGG GAACGTCTCT GCACTGTTCT CGCCGATAAA 
CATAACGACG CACCGGAAAC GGTTGTGAAT GCCGTACTTG AAGAAATAGC CTGTTTTACC 
GGCACCACGG TATTCCAGGA CGACATATCA TTGGTCATTC TCAAGACAGT GTGA 

 

Protein sequence

MSTPLRVLIV DFSEDDVGLL VRALQACGYD PAYDVVETYA AMKEAIVNHS WDVVISKYAL 
PFFNARSALS LCREINQDLP FMIISDSTDE YTAAQAMTPA ANDYFLKAYL TRLVPAVKRE 
LQEAEERRKR RDAEEALVRS EHRYKRLVAA VTDYIYTVKI ENGQVSSTSH GPGCVTVTGY 
TPEEYHDNQH LWYQMILEDD RQRVMEHAGA LLSGMDVPSI EHRIIHKDDS IRWVKNTIVP 
RHNELGSLVG YDGLISDITE RKQAETSLRL QSAALEAAAN AIVITDHTGD IIWVNPAFTL 
LTGYCQEEVV HQNLRFLKSG KHDDGFYRHL WETINSGMVW HGETTNRHKS GYYYLEEQTI 
TPVMDERGKI CHFVAVKQNI TERKLAEKAL LENIQMSREM EIAKRIQLSL LPAFPPKLYG 
VQCASRCVPA THVGGDYYDF FHHSENSIDM VIADVSGHSV GAALIMAETR SALRVQVNAA 
NSTTTILSDL NDLLFEDLSK AELFISMFYI KYNSLKRQLT YSNAGHNPPL LFRPSEMSFT 
ELDAEGLILG VQRDVDFEEK NIQLYVGDLL VLYTDGIVEA RNATGDFFGR ERLCTVLADK 
HNDAPETVVN AVLEEIACFT GTTVFQDDIS LVILKTV