| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1960 |
|---|
| Symbol | |
|---|
| ID | 5165664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2269876 |
|---|
| End bp | 2271453 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640549454 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001230723 |
|---|
| Protein GI | 148264017 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG TGAGCCGTCT CCAGAAACTC AATAAAAGCT TCCGCTTCAG ACTCTTTGCC
GTCTTCACTA TCATCACCAC CCTTATTACC ACCCTCTTTA CGGCGCTATT TGTCGAACAT
GAAATCCGCT CTTACCGGTT GCAGGCCTCT GAAAAAACGC TCCTGCTGAC ATCACTGCTC
GCCAACAGCA TTCGCCTACC ACTATATGCA GAGGACAAAG AGACGCTGGA GCGGATTGCT
GCCGAAACGG CGCAGAAACC CGACGTTGTC GGTATAGTCA TAACCAACAA CGACGGTAAG
GTCTTGGTCG AACTCAGAAA ACGAGAAAAC ACAACACCGG CGACCACCCT GAGCGTAACG
GTTACCGTCG ATTCCGGGAG CCTGGCAGCC TCTGCAGAAT CGGCTCTGAC AGGCAATCCC
GCCACTTCAG GAAAAGCTCT CGGCACTGTC CGACTGGCCC TGAATTCGAA CGACCTTCCC
AAAAAGACGC GCGAGCTGGT CATATTCTCC GCAACCATGG CCTTATTCTT CTGGCTGATG
GTGCTATCGC TCAGTTACCT GGCGCTGAAA AAGGCCACGC ATTCGTTCAA TGCATTGATG
CAGGGGGTGA AAACAATCGG AATGGGGGAC TATTCCGTGA GAATCGCAAC GGAATCCGAT
GACGAACCCG GACAGGCCGC CATGGCGATC AACGACCTGG CCGCCTCCCT GGAGAGCCGC
GAGGCTGAAA ACCGTCGTTT GCAGGAAGAA TTGTTCAACG CCATGAAACT CGAAGTACGT
GAAGAAAGAA AACAGCTCAT GGCCAAATTG ATCCAGACGA ACCGGATGAC GTCGCTGGGG
CTACTCGTAT CGAGCATGGC CCATGAGATC AACAACCCCA ACGGCGCAAT AAGGCTTGCC
GGACAGTACC TGAACAAGGC CTGGAAGGAT ACGGTGCCTA TTCTGGAAGG TGTTGCCAGG
GAGGAAGGGG ATTTCAGCAT CGGCGGCATA CCTTTCAGTA TGGCCGGCGA GGAGGTTGCC
AGGAGCGGAA TGAACATCAT CCGCAATACG GAGAGGATTG AACAGGTAAT CAAGAATCTC
AGGGCCTACA GCCTCGGCGA CCGGAACGAG TTCCAGTCCG ACGTGAACGT GAACCAGATC
ATAAACGACG CCCTGGCAGT TATCCGTATC CACGGCCACC ACGGCAATCT TTCCATCGCC
CAAGAACCGG ATCCCGACCT GCCACTCATC ACCGGCAACC GGCACCAGCT CGAACAGGTC
GTCATCAACC TGCTCCTCAA CGCCATCCAG GCCATGCCCA ACGGGATGGG GACCATCAAA
CTCGTGACGG TCCTCGACCG GATATGCGGT GAGGTGCTCA TTTCCGTGGA GGATGAGGGG
GAAGGCATAC TGCCGGAACA TCTGGAAAGG ATCTACGAAC CGTTCTTCTC CACCCGCATC
GACAACGGGG GGAGCGGTCT GGGGCTCTAT ATCTCCAACT TCATCGTAAT CGAGCACCAG
GGGAGGTTTG AGGTGCAATC CGAACCCGGC AAGGGAACGA TTTTCACCAT AAGGCTCCCC
CTGTCGCAGG CGGCGTAG
|
|---|
| Protein sequence | MSIVSRLQKL NKSFRFRLFA VFTIITTLIT TLFTALFVEH EIRSYRLQAS EKTLLLTSLL
ANSIRLPLYA EDKETLERIA AETAQKPDVV GIVITNNDGK VLVELRKREN TTPATTLSVT
VTVDSGSLAA SAESALTGNP ATSGKALGTV RLALNSNDLP KKTRELVIFS ATMALFFWLM
VLSLSYLALK KATHSFNALM QGVKTIGMGD YSVRIATESD DEPGQAAMAI NDLAASLESR
EAENRRLQEE LFNAMKLEVR EERKQLMAKL IQTNRMTSLG LLVSSMAHEI NNPNGAIRLA
GQYLNKAWKD TVPILEGVAR EEGDFSIGGI PFSMAGEEVA RSGMNIIRNT ERIEQVIKNL
RAYSLGDRNE FQSDVNVNQI INDALAVIRI HGHHGNLSIA QEPDPDLPLI TGNRHQLEQV
VINLLLNAIQ AMPNGMGTIK LVTVLDRICG EVLISVEDEG EGILPEHLER IYEPFFSTRI
DNGGSGLGLY ISNFIVIEHQ GRFEVQSEPG KGTIFTIRLP LSQAA
|
|---|
| |