| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1929 |
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| Symbol | |
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| ID | 5165138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 2233390 |
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| End bp | 2235780 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640549423 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001230692 |
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| Protein GI | 148263986 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.114575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTATA TAAAACAGAT GTCAACAGTG CTTTTTTGCC TGGCAATTTT ATCGGGTTGT
GCAGGCGGTC GCTCTGCATT CAGCAAAGCA GAAAAGCTCG AACGTGATGG GCGTCTGGAT
GAAGCAGTGA TGAAATATGC AGAAGTTGTA GCGGCAAATC CTGGTGTAGG TGAATATCGG
GCTAAGTACC TGCAATCAAG TGCTGCCGCA GCTCAAAAAC ATCTTCAAAA AGGGGACGAT
TTTGCTGCTG CTAAAAAATA TGACGATGCT TTACGGGAAT ATCAGACGGC ATTTGCACTA
GATTCTTCAT TGGCGCGTGC AAAGCAGGAA AGCGATCAGG TTATAAAGCT CAGAAACGCT
GAAGTCTATT TTAAGGAAGG CGAGGAGTTT GAAAAAAACC GTAAGCTCAA GGAAGCTGTC
CGTGCCTATC AGAAGGCGCT TGAATTCGAC CAAAACAACA GTGCTGCCAA AGATGCAGTC
GAGAGGCTTA TAAAGAGTAA ACGGCCGAAA CTCGACGGTT ATGAACTAAA TCTCAAATCA
AACAAACCGA TCACACTTAA GTTCAAGGAT GCAAAAATTA AGGAAGTTTT TAATATCATT
TCTCAACTTT CCGGCATCAA CTTTGTTTTC GACGAGGGCG TAAAAGACCA GAATGTGTCT
ATTTATCTGG AGAATGCCAC GTTCCAGCAG GCGCTGGAGA TCATATGCGG CATCAACAAG
CTCGGAAAAA AGGTGCTGAA CGAGAACACC ATCATTATTT ATACTAAAAA CCCCGAAAAA
ACCAAACAGT ACGAGGAGTT GTTCGTACAG ACTTTTTATC TCAATAAACT TGAGGCAAAA
AAGGCGGTAA ACCTTATCCG CACCATGCTG CAGGTAAGAA AGATCTACGT GAATGAAGAG
ATGAATGCCC TTGTAATACG CGATACACCG GATGTCATCG AGGTTGCCCA GAAGATACTG
GAAGCTAATG ATCTTCCCGA TGCAGAAGTG GTATTGGAGG TTGAAGTGAT AGAGATCTCC
AAGAACAACG CAGAGAGCTT TGGTCTTGCA TTGAGCAGAT ACGCTGTTTC CACAGCTGCA
GCAGCGGAAG GCTCCTCAAC GTTTCTCTCG GATGTACTTG TGCCACCTGT TTCTACAACT
CCAACAAATA CAACTAACAC TCCAACTTCG AATCTCCTGA ATTACTTTAG ATGGCGTGGC
TTTAACGGGT TTCTTACGGT ACCGAATGCC ACGTTCAATT TTGGCAAGAC CCTGTCAAAC
AGCGAAACAT TGGCAAATCC GAAAATCAGG GTCAAAAACA GAGAAAAGGC CAAGTTTAAT
GTCGGTCAAA GGGTCCCCAT CACAACCACC TCATCTCCGA CCGGCGGCGG AGTCAGTGTC
AATGTCCAGT ATGTGGATGT AGGGGTGAAG TTGAACGCCG AACCGACCAT TCAGCTTAAT
AATGAGGTTT CAATCAAGCT AAGCCTTGAG GTTAGTTCAA TCCTCAGCAA GGAGAAGGTG
GGGTCGACGG ATTCGTTGAC AACGGTTGTG ACCATCGGCA CCCGCAACCT CGATACAGTT
TTAAGTCTCA AGGATGGTGA GACCAGCATT ATCGGTGGCC TTATGCAGGA TTTAAAAAGC
AAGAACAAGC AAAAAATCGT GCTCTTGGGG GATATTCCTC TCATTGGACC GTTGTTGTCC
CAAAATGATG ACACAAATAA TAAGTCTGAA CTGGTGTTGG CGATAACTCC GCGGATAGTA
CGTTCGATAA CCATTCCTGA AGGGGATGTT GCTGCTTTCT GGTCCGGTAA GGAAGATGAA
CCATCCACAT CAAAACCATA TTCCTCCTTT ATTCAGGAAC CTGAAATATT ACCTGCGCCG
CCGATTTCGC CGCTCCCGGC AGGGGAGCCT CAAAAGCAGC CTGCTGCCGA AGTTCAAAAA
GCACCGGCAG TTCCGCCGGC CACGGGGGCA AAGGTTGAGC CGGAGAAAGC TCCTGCCCCA
CGAATAACCT TGAATGTCGT TGCCCCCGCT TCAGTCAAGG TGAATGAGCA GTTTAGCGTT
GGGATAAAAG TAGCCGATGC AAATAATCTA TTAAACGCAC CCTTGACGCT GGTTTATGAT
CCTTTGTTTC TGGATTTTGT CGGCTTGGCC GAGGGGGGAT TTATGAAGCA GGATGGGAAA
GCAACCCTTT TCCGGCCCAC CATCGATAAA AATACCGGTC AAATTGCCGT TACCCTCAAC
AGAGTGGGGG ACGTCGGCGG GATAAGCGGG AGCGGCACCC TGCTTACTGC AACATTCAAG
GCCAAGAATC AAGGGCCGGC CAGTATCGGT TTTCTCGATG TAAATTTCAC CGCGCCCGGC
GGAAAACCGC TGGAGGCAAT TCCGTATAAT GCAGTAGTGG ATATTAAGTA G
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| Protein sequence | MRYIKQMSTV LFCLAILSGC AGGRSAFSKA EKLERDGRLD EAVMKYAEVV AANPGVGEYR
AKYLQSSAAA AQKHLQKGDD FAAAKKYDDA LREYQTAFAL DSSLARAKQE SDQVIKLRNA
EVYFKEGEEF EKNRKLKEAV RAYQKALEFD QNNSAAKDAV ERLIKSKRPK LDGYELNLKS
NKPITLKFKD AKIKEVFNII SQLSGINFVF DEGVKDQNVS IYLENATFQQ ALEIICGINK
LGKKVLNENT IIIYTKNPEK TKQYEELFVQ TFYLNKLEAK KAVNLIRTML QVRKIYVNEE
MNALVIRDTP DVIEVAQKIL EANDLPDAEV VLEVEVIEIS KNNAESFGLA LSRYAVSTAA
AAEGSSTFLS DVLVPPVSTT PTNTTNTPTS NLLNYFRWRG FNGFLTVPNA TFNFGKTLSN
SETLANPKIR VKNREKAKFN VGQRVPITTT SSPTGGGVSV NVQYVDVGVK LNAEPTIQLN
NEVSIKLSLE VSSILSKEKV GSTDSLTTVV TIGTRNLDTV LSLKDGETSI IGGLMQDLKS
KNKQKIVLLG DIPLIGPLLS QNDDTNNKSE LVLAITPRIV RSITIPEGDV AAFWSGKEDE
PSTSKPYSSF IQEPEILPAP PISPLPAGEP QKQPAAEVQK APAVPPATGA KVEPEKAPAP
RITLNVVAPA SVKVNEQFSV GIKVADANNL LNAPLTLVYD PLFLDFVGLA EGGFMKQDGK
ATLFRPTIDK NTGQIAVTLN RVGDVGGISG SGTLLTATFK AKNQGPASIG FLDVNFTAPG
GKPLEAIPYN AVVDIK
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