Gene Gura_1068 details

Gene Information

• Locus tag: Gura_1068
• Symbol: rplD
• ID: 5166005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 1274040
• End bp: 1274663
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640548569
• Product: 50S ribosomal protein L4
• Protein accession: YP_001229847
• Protein GI: 148263141
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000351414
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGT TAGACGTTTT CGATATTAAA AATAAAAAGG TCGGTGAAAT TGAACTTAGC 
GACTCAGTGT TTAACGATGA GGTTAAAGAG TATCTCATTC ATGAGGCGGT AAAGATTCAA 
TTGGCAAATC GTCGTGCTGG CACAGTCGGG GTTAAAAACC GTTCGGCAGT TGCAGGCAGC 
GGTAAAAAGC CTTTCAAGCA AAAGGGAACC GGTCAAGCTC GTCAGGGTTG CCGTAGAGCA 
CCACAATATC CTGGTGGTGG TGTTGCATTC GGTCCCCAAG CAAAAACATA TAATCTTTCT 
ATGAATAAGA AAGCAAGAAG AGCTGCGATG CGTTCTGCAT TGTCTTTATT ATTTAAAAAT 
AACAAGCTGA CTGTGCTCAA CAACATAGAT CTCGACAATG TTTCGACGAA AAACTTTGTC 
GGTATTTTAA ATGGTTTCAC ATTGGATAAG ACACTTGTTG TTACTGACGT TGAAAATCGT 
AATCTAGAGC TCTCAGCGCG TAATGTGAAA AATGTTAAAG TATTAAAGTC CGAGGGATTG 
AATATTTTTG ACATTATGAA ATATCAAAGT GTCATTTTCA CTGAGAATTC AGTGCGCAAA 
GTTGAAGGAG CGTTACAGTC ATGA 

 

Protein sequence

MAKLDVFDIK NKKVGEIELS DSVFNDEVKE YLIHEAVKIQ LANRRAGTVG VKNRSAVAGS 
GKKPFKQKGT GQARQGCRRA PQYPGGGVAF GPQAKTYNLS MNKKARRAAM RSALSLLFKN 
NKLTVLNNID LDNVSTKNFV GILNGFTLDK TLVVTDVENR NLELSARNVK NVKVLKSEGL 
NIFDIMKYQS VIFTENSVRK VEGALQS