Gene Gura_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_0812 
Symbol 
ID5162645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp968096 
End bp968902 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content59% 
IMG OID640548310 
Productcarbohydrate-selective porin OprB 
Protein accessionYP_001229593 
Protein GI148262887 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTAT TCAAGGATGA CACCCAGTTC ATGAACCTGG CCTTCAACAT CAATCCGACT 
CTCCTGCTGA CTTTCCCCTA TTCGCCGCTG GCTGCCGGCA TGATCATCCT CCCGACCAAG
GACCCCAAGG GCGCCGTTGT GACCTTGCTC GTTGCGAATT CCGTGGGAGA TGCCAACACA
ACCGGCTTCA GTACACTGAA TAAGAACAGG CTGAGCTTTG TCGGCGGGGG ACGGGTGCGG
ACCAACTTCT TTGGGCTTAC TGGCCATCAA CTGGCCGGGA TAAGCTATTC CAACAAGGAG
TTCGCATCCC TTGACCAGAG GCTGGCCAAC ATCGCGACCA ACAACATTGC CAAGGAAAAA
GGGTCCCTGG CCTTCTACTA CAACTTCGAC CAGTACCTCT ACGAACCTGA AAAGGGCTCT
GGCAAGGGCT TCGGCATCTT CGGCCGATTC GGTGTCTCGG ACGGCAACCC CAACCCCCTT
CACTATTTCT TCAGCCTCGG CGTCGGCGGC AAGGGGATGA TGGCAAGCCG GCCCCATGAC
CAGTTCGGCA TCGGCTGGTA CTACATCGAT GTCAGGAACC CTTCCTTCAC TGGTCCGCTG
GCGACCCGTC AGTTCCTCAG GAACGAGCAA GGGGTCGAGG CTTACTACAG CGTCGCTCTG
ACCCCGTGGG CCCTGTTGAC GCCGGATATC CAGGTCGTGC ATCCGGCCCA GAAAGACACC
GTGGACCTGA GCAGGCCGGT CCCGTTCGTC AGGGAGGGGG TCAACACCGC AACGATCCTC
GGGCTCAGGC TGCAGATGGT GTTCTGA
 
Protein sequence
MPLFKDDTQF MNLAFNINPT LLLTFPYSPL AAGMIILPTK DPKGAVVTLL VANSVGDANT 
TGFSTLNKNR LSFVGGGRVR TNFFGLTGHQ LAGISYSNKE FASLDQRLAN IATNNIAKEK
GSLAFYYNFD QYLYEPEKGS GKGFGIFGRF GVSDGNPNPL HYFFSLGVGG KGMMASRPHD
QFGIGWYYID VRNPSFTGPL ATRQFLRNEQ GVEAYYSVAL TPWALLTPDI QVVHPAQKDT
VDLSRPVPFV REGVNTATIL GLRLQMVF