Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0812 |
Symbol | |
ID | 5162645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 968096 |
End bp | 968902 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640548310 |
Product | carbohydrate-selective porin OprB |
Protein accession | YP_001229593 |
Protein GI | 148262887 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGTTAT TCAAGGATGA CACCCAGTTC ATGAACCTGG CCTTCAACAT CAATCCGACT CTCCTGCTGA CTTTCCCCTA TTCGCCGCTG GCTGCCGGCA TGATCATCCT CCCGACCAAG GACCCCAAGG GCGCCGTTGT GACCTTGCTC GTTGCGAATT CCGTGGGAGA TGCCAACACA ACCGGCTTCA GTACACTGAA TAAGAACAGG CTGAGCTTTG TCGGCGGGGG ACGGGTGCGG ACCAACTTCT TTGGGCTTAC TGGCCATCAA CTGGCCGGGA TAAGCTATTC CAACAAGGAG TTCGCATCCC TTGACCAGAG GCTGGCCAAC ATCGCGACCA ACAACATTGC CAAGGAAAAA GGGTCCCTGG CCTTCTACTA CAACTTCGAC CAGTACCTCT ACGAACCTGA AAAGGGCTCT GGCAAGGGCT TCGGCATCTT CGGCCGATTC GGTGTCTCGG ACGGCAACCC CAACCCCCTT CACTATTTCT TCAGCCTCGG CGTCGGCGGC AAGGGGATGA TGGCAAGCCG GCCCCATGAC CAGTTCGGCA TCGGCTGGTA CTACATCGAT GTCAGGAACC CTTCCTTCAC TGGTCCGCTG GCGACCCGTC AGTTCCTCAG GAACGAGCAA GGGGTCGAGG CTTACTACAG CGTCGCTCTG ACCCCGTGGG CCCTGTTGAC GCCGGATATC CAGGTCGTGC ATCCGGCCCA GAAAGACACC GTGGACCTGA GCAGGCCGGT CCCGTTCGTC AGGGAGGGGG TCAACACCGC AACGATCCTC GGGCTCAGGC TGCAGATGGT GTTCTGA
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Protein sequence | MPLFKDDTQF MNLAFNINPT LLLTFPYSPL AAGMIILPTK DPKGAVVTLL VANSVGDANT TGFSTLNKNR LSFVGGGRVR TNFFGLTGHQ LAGISYSNKE FASLDQRLAN IATNNIAKEK GSLAFYYNFD QYLYEPEKGS GKGFGIFGRF GVSDGNPNPL HYFFSLGVGG KGMMASRPHD QFGIGWYYID VRNPSFTGPL ATRQFLRNEQ GVEAYYSVAL TPWALLTPDI QVVHPAQKDT VDLSRPVPFV REGVNTATIL GLRLQMVF
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