Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0806 |
Symbol | |
ID | 5165335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 962876 |
End bp | 964525 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640548304 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001229587 |
Protein GI | 148262881 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATGT TCCGCAGAAT TTTAATTATT CCAGTCCTAT TCTTTATGCT TGCCGGCACG GCTTTTCACA TGTCTGCGGC GGGGGAAGAG AGCCGCACGG GAGCTGTCGC CACGCCCGAA GCCGAGCTCA CAACGGCCCC GGTGGAGATT GACGGCCAGG TGCTGTTTCG CGTCCGGGGG GCATCATCAT ATCCGGCCGA GCAACGTGCC GCCGCCATCA AGGAACGGAT CGAGGCGGTT GCCGCGGACC GCTCCTTCCG CAGCGACGGG TTGCGCATCG ACGATGCCGA CAACACCATG ACGATCGTGG CCGGGGACCG GCCCCTGATG GTCCTGACCG AAGCGGACGC CAGGCTGGAG CATCTGAGCC GCCAGTACCT CGTCAGCGTA CACCTGAAGA GGATCCGCCA GGCCATCGAC GATTACCGTC GCATGCGCAG CAATGACGCC CTGCTGCGGG GAGGTCTGTA CGCAGCGGGG GCAACTGTTC TGCTGGTTCT GGGGATGGTG TTCCTTGTCC GGCTGGGGCG GCTGCTCGAC AAAGTGCTGA CGGAACGGGT GAAGAAGCGG ATCCATTCCG TCGGCATCCA GTCTTTCGAG ATCGTGCCGG CGGAGCATAT CTGGGGGGCG CTCCACGGCA TGCTGTACGG CGTCCGCATC GGGACCATTC TGGCGGTGTC CTTTGTCTAC CTGCAAGGCG TGCTTGCGCT CTTCCCCTGG ACGAGCGGCA TCGCCAGCCG GCTCCTCGAC CTCGTTACCG ATGCGCTGGG TCATATGGGC AAGGCTGTCG TGGCCTGGAT CCCCGATCTG CTCGTCCTCA TCATCCTCTT TTTTCTTTTC CGTTTTATCC TGCGGTTTCT CCGTCTCTTC TTCGACGCCG CGGCGCGTAA AACGGTCACC CTTGCGGGGT TCGATGCGGA TTGGGCGCAT CCCACCTACA AACTCGTCCG CTTTGCGGTC ATCGCCTTCG GTCTGATCGT GGCCTACCCG TACATCCCCG GCTCCGAGTC GGCGGCATTC AAGGGAATTT CGCTCTTCAT CGGCGTGGTG TTTTCCCTCG GCTCATCCAC GGCAATCTCC AATATCATCG CCGGCTACAT GATGACCTAC CGACGGGTGT TCAAGGTCGG CGACCGGGTC AAAGTGGGTG ACGTGATCGG TGACGTGATC ACCATGCGGC TCCAGGTGAC CCATCTTCGT TCCCTGAAGA ACGAGGAAGT GACCATCCCC AATTCCCAAA TCCTCAACGG TCATGTCGTG AACTACAGCT CCCTGGCCCA CACACCAGGG CTGATCCTGC ACACCACGGT CGGAATCGGC TACGAGACCC CCTGGCGGCA GGTGGAGGCG ATGCTGGTCC AGGCGGCGGA ACGCACCCCG GGGCTGCTCA AGGAGCCGCG TCCGTTCATC CTGCTGATGG GGTTAGGGGA TTTCGCGATC AACTACGAGC TCAATGTCTA CTGCGACAAC CCCCGTGAGA TGAACAGCCT CTATACCGAG CTGCACCGGC ATATTCTCGA CGTTTTCAAT GAGTACGGCG TGCAGATCAT GACTCCCGCC TACGAGGCCG ACACGCGGGA GCCGAAGGTC GTGCCGCGGG AGCAGTGGCA CGCGCCGCCT GCGCCACCCG AGAGCGGCGT CACCGGCTAA
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Protein sequence | MVMFRRILII PVLFFMLAGT AFHMSAAGEE SRTGAVATPE AELTTAPVEI DGQVLFRVRG ASSYPAEQRA AAIKERIEAV AADRSFRSDG LRIDDADNTM TIVAGDRPLM VLTEADARLE HLSRQYLVSV HLKRIRQAID DYRRMRSNDA LLRGGLYAAG ATVLLVLGMV FLVRLGRLLD KVLTERVKKR IHSVGIQSFE IVPAEHIWGA LHGMLYGVRI GTILAVSFVY LQGVLALFPW TSGIASRLLD LVTDALGHMG KAVVAWIPDL LVLIILFFLF RFILRFLRLF FDAAARKTVT LAGFDADWAH PTYKLVRFAV IAFGLIVAYP YIPGSESAAF KGISLFIGVV FSLGSSTAIS NIIAGYMMTY RRVFKVGDRV KVGDVIGDVI TMRLQVTHLR SLKNEEVTIP NSQILNGHVV NYSSLAHTPG LILHTTVGIG YETPWRQVEA MLVQAAERTP GLLKEPRPFI LLMGLGDFAI NYELNVYCDN PREMNSLYTE LHRHILDVFN EYGVQIMTPA YEADTREPKV VPREQWHAPP APPESGVTG
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