Gene Gura_0083 details

Gene Information

• Locus tag: Gura_0083
• ID: 5164678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: +
• Start bp: 119949
• End bp: 120635
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640547581
• Product: ABC transporter related
• Protein accession: YP_001228872
• Protein GI: 148262166
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTTA TCGAGATTAA AAACGTGAAG AAACACTATA CCAGCGGCGA TGATGTGGTC 
GAAGCGCTGC GTGGTGTGGA CATAACCATT GAGGCTGGTG AATTCATCAC CATCATGGGA 
CAGTCCGGTT CCGGCAAGAG TACCCTGCTG TCCGTACTGG GGGGAATGAA CCATCCCACA 
ACGGGAGACG TGGAGATGGC CGGGGTCAAG CTGTATCAAC TCCCCGGCGA AAAACTGGCC 
GACTTCCGGG CGCAAAACCT GGGGTTTGTG TTCCAGTCAT TCCACCTGAT CCCTTATCTG 
ACCGCCATCG AGAATGTCAT GCTGCCGCTG GCCATCGTCA AGACGAGCAC ACCGGCAAAA 
AAGACCGCCG CCCGGCAGGC CCTCGAACGG GTCGGTCTCG GCACCAAGCT GGACCGTCTC 
CCCAACCAGC TCTCCGGAGG AGAACAGGAA CGGGTGGCCA TTGCCCGGGC CATCGTCAAT 
AATCCCCACA TACTCCTTGC GGACGAACCG ACCGGCAACC TGGATTCAAA GACCAGCGAG 
GAGGTTATGG CGCTCTTCCG TGAACTGAAC GACGCCGGCC AAACCGTTGT CATGGTAACG 
CATAACCCTG AGAACGGAAC TTATTCCGAT CGAACCATCA GCTTGAAGGA CGGCATGGTA 
ATGAATCAGG TGCTTGGCTG CAATTGA 

 

Protein sequence

MALIEIKNVK KHYTSGDDVV EALRGVDITI EAGEFITIMG QSGSGKSTLL SVLGGMNHPT 
TGDVEMAGVK LYQLPGEKLA DFRAQNLGFV FQSFHLIPYL TAIENVMLPL AIVKTSTPAK 
KTAARQALER VGLGTKLDRL PNQLSGGEQE RVAIARAIVN NPHILLADEP TGNLDSKTSE 
EVMALFRELN DAGQTVVMVT HNPENGTYSD RTISLKDGMV MNQVLGCN