| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0248 |
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| Symbol | avhB11 |
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| ID | 5148628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 180987 |
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| End bp | 182018 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640539124 |
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| Product | Type IV secretory pathway AvhB11 protein |
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| Protein accession | YP_001220557 |
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| Protein GI | 148241056 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.776231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCGG TACACTCCAT CGAACGCGAC GGCAGTCGGC TCGTGCTGGC GCGCTACCTG
GAGCCGCTGG CTCCATTCCT GGCGGACAAG TCCCTGACCG AAATCGTCGT CAATCGTCCT
GGCGAAATTT TCGTGGAAGG TCCTGGCGGC TGGACCCGGC ACGAAGCGCC AGCACTGACG
CATGCCTACC TCTCACACCT CGCAACCGCG GCCGCCGGCC ACACCCGTCA GGACATCAGT
CCGGAGCATC CCGTGGTGTC GACGACTCTG ATCGGGGAGG AGCGCTGCCA GATCGTGGTC
CCACCAGCCG TGCCAGCCGG CATGGTCAGT CTTACGATCC GCAAGCCGTC GGCTTTGACA
ATGACACTGG AGGCCTTCGA GCGCGCAAAA CTGTTTGATG AGGTCCGTGT CGCCAATGAC
CGATTAACTG CCGATGAGAC TCAGCTTCTG GCCCTGAAAG AAGCCGGTGC CTGGCGCGAC
TTCCTCCAGC TTGCCGTGGA AACTCGTCGC AACATCATCG TTTCCGGGGC GACTGGTTCG
GGAAAGACGA CGCTATCCAA GGCGTTGATC GCGGCGATCC CGGCTCAAGA GCGGCTCATT
ACAATTGAGG ATACCGCCGA GCTTGTCATC CCTCATCAGA ATTGCGTGCG GCTGCTCTAT
GCCAAGGACG GGCAGGGCGT TGCTAAAATT GGACCGCGCG AGCTCCTCGA GTCCTGCCTG
AGGATGCGGC CGGATCGCAT TCTGTTGCAA GAGCTGCGCG ATGGGACCGC ATTCTTCTAT
CTGAGGAATG TGAACTCGGG CCATCCGGGA TCGATCACGA CCGTTCATGC CGACAGTGCC
CGGCTCGCCT TCGAGCAGCT GACGTTGTTG GTGAAGGAAA GCGCGGAAGG CCGAGACCTT
CATCGCGACG ACATCCGCTC GCTCCTGCTG CTCCTCGTCG ACGTCGTCAT CCAGATGCAG
AAGCGGAACG GCCGCTACCG CATTTCGGAG ATATATTATG ACCCCGCTCG CAAACGCGAC
CACCTCAGTT AG
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| Protein sequence | MSAVHSIERD GSRLVLARYL EPLAPFLADK SLTEIVVNRP GEIFVEGPGG WTRHEAPALT
HAYLSHLATA AAGHTRQDIS PEHPVVSTTL IGEERCQIVV PPAVPAGMVS LTIRKPSALT
MTLEAFERAK LFDEVRVAND RLTADETQLL ALKEAGAWRD FLQLAVETRR NIIVSGATGS
GKTTLSKALI AAIPAQERLI TIEDTAELVI PHQNCVRLLY AKDGQGVAKI GPRELLESCL
RMRPDRILLQ ELRDGTAFFY LRNVNSGHPG SITTVHADSA RLAFEQLTLL VKESAEGRDL
HRDDIRSLLL LLVDVVIQMQ KRNGRYRISE IYYDPARKRD HLS
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