| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0174 |
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| Symbol | hypD |
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| ID | 5148560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 130455 |
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| End bp | 131594 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640539073 |
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| Product | hydrogenase expression/formation protein |
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| Protein accession | YP_001220506 |
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| Protein GI | 148241005 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC CTGCACGGGC CTGGCTCAAG CGCATCCACG ATCTTCCGCT CACCCGGCCG
GTCGGAATCC TCAACGTGTG TGGCGGTCAT GAGCGGACGT TGGCGGCGGC AGGGCTCAGA
GCGCTAATGC CATCGGGTGT GAATCTGATT CCGGGCCCGG GATGTCCGGT TTGTGTTTGT
CCCGAAGAAG ACGTTTTCGA GGCCATACGC CTAGCCCTGT CTGAGCGGGT CATTCTGGTC
GCATTCGGGG ATATGTTGCG GGTGCCGGTC AATGAGCCCA AGGGACAGCC GAGGTCGCTT
GAACAGGCCA AGGCTGCAGG CGCCGACATC CGACCCATCG CCAGCCCAAT GGAAGCTGCC
GCGATCGCCA AAGACAATCC GACGCGCTCA ATCGTATTTT TCGTTGCCGG CTTTGAGACC
ACGCTCGCCC CGGTGGCGGC GTTGATAAGC CAGGAACTAC CGCGAAATCT GCTGCTCCTG
GTGTCGGGGC GGCTGACCTG GCCGGCGGTC GCGATGCTGT TGCAGTCCGA GCGGCCCGGC
TTCCAGGCCC TGATTGCGCC GGGTCATGTA GCCACGGTCA TGGGGCCGGA AGAGTGGGAT
TTCGTCGTCC GCGATCACGA CATGCCTGCC GCTATAGCCG GCTTCACCTC GGAAAGCCTC
TTGGCCGCGA TCTATTCGAC GTTGCGTCAG ATCGCCGATG GCCGGGTCTT CCTCGACAAT
TGTTACCGCG AGAGCGTCAG GCCGGGCGGC AACCCGACGG CGCGCCGTTG CATCGCTGAG
ACCATGGAAG TGGTCGATGC GGACTGGCGG GGTATAGGGT CCATTGCACG TTCTGGCTAC
CGGCTGCTTC CCGAGTTCGC CGCGCACGAC GCAAGGCTTC GCTTTCCGTT GGAGAACGGC
AAGGAACGGC TGCGTCGCGG CGAAATGCCG CCCGGCTGCG ACTGTGCCAG GGTCATCCTT
GGAAAAGTGT TGCCAACCGA CTGCCGGCTC TATGGCGCCG CTTGCACGCC CGCGACACCC
ATCGGCCCCT GCATGGTTTC CGACGAGGGA GCCTGCCATG TTTGGTGGAG TGCGGGCCAT
CGACATGGCG CGAGATCCCG CTCAGGGTCG GTTGGGCCGG CTCTCAGGGA GGTGGGATGA
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| Protein sequence | MTTPARAWLK RIHDLPLTRP VGILNVCGGH ERTLAAAGLR ALMPSGVNLI PGPGCPVCVC
PEEDVFEAIR LALSERVILV AFGDMLRVPV NEPKGQPRSL EQAKAAGADI RPIASPMEAA
AIAKDNPTRS IVFFVAGFET TLAPVAALIS QELPRNLLLL VSGRLTWPAV AMLLQSERPG
FQALIAPGHV ATVMGPEEWD FVVRDHDMPA AIAGFTSESL LAAIYSTLRQ IADGRVFLDN
CYRESVRPGG NPTARRCIAE TMEVVDADWR GIGSIARSGY RLLPEFAAHD ARLRFPLENG
KERLRRGEMP PGCDCARVIL GKVLPTDCRL YGAACTPATP IGPCMVSDEG ACHVWWSAGH
RHGARSRSGS VGPALREVG
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