| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0167 |
|---|
| Symbol | |
|---|
| ID | 5148716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | + |
|---|
| Start bp | 123959 |
|---|
| End bp | 125239 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640539067 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_001220500 |
|---|
| Protein GI | 148240999 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAC AAGTGCGCCT TCAACCCCTT TCGATCCGCG CAAGGTTTGC CCTGCTCCTC
GGAATATTCG CGGTCGCCGT CGGCTATGGC ATTGTGATGC CGATCTTGCC CTTCGTCATC
GAGCGTCTCG CGATGACTGC GGACGCCACG ACCCTTTCGC GGCATACAGG ATTCCTGGCG
GGGGTCTATG CGCTCGCTAT TTTTCTGTTC GCGCCGGCTT GGGGCAGGGT TTCGGACCAG
CGCGGACGGC GCCCGGTCAT CGTCACGGGA TTGGTCGGTT TTGCAATCAC GTTGGGTATC
TTCGTGCTCG CGGACAGCCT GCCGTTGCTC TACGTGGGAC GCTTTCTCGC CGGTCTGTTC
GCGGCGGCGG TCGCGCCAGC GGCCTATGCC CTCGTTTGCG ATCACGCGCC CTCCGATGAG
TGGCGGGCGC ACCGTTTTGC CTTGATCAAC GTCGCAGGCG CGGCTGGGTC ATTTGCTGGG
CCGACGGTAG GCGGCATGAT TCTGCAGGCA CGCTTTGCCG AGGCAATTGC TGGGAGGTTC
ACTTCGCCCG TTGTCGCGGC GGTGAGTGTT GCGTTGGCGG CAGCGTTGGC GATACAAGGC
TTGGTGCCTG CGACAGCGCA GAGAAAAGAT AGTGAAATGG CCTTTGCGGC ATCTGCACCG
GGTGATCGCG AGCTCGTGCT ACGTCTATGC GGCCTTATGT TTGTCACGAC CGCCGCGGTC
AGCGCGTTCG ACGTCGGGCT GCTGTTGCGA GGCAAACAGG TTCTTCGCAT GGATGCCTGG
CAACTAGGCG CGATGTTCGC CGAGTGCGGT TTGGTGATGC TGTTTGTTCA AGCAATTGTG
TTTTCGCCGC TAATCAAACC ACAAACAACG CGCTGGTTTT TGACCCCCGG CCTGATTGCT
TTAACCGCAG GCCTCATCGC GATCCCGTTG GCCAGCAGCT ATGTGCTTAC CTCCGTCGGG
ATTGCAGTCG TTGCTGCAGG CGCCGGCCTC GTGTATCCAA TTGTGACGTA TTGGGTGCCT
CTCGGGTCCA ACGGTACCCG AGGAGCCGAT CTCGGCCGCG TAACGGCGGC TGCGAGCCTC
GGGCAGGCAC TCGGCTCGAC TGCCGGCGGA CTGCTGTTCG ATGCATTGAT CCTGCCAAAT
GCAGTCTTCA GTTCCGCTGC ACTGATGGCA CTGGCGGGCG CGGGTGCCAG CATTGGCCTG
CCGCGCCTGT TGATGCCCCG TGATCGCATT GTCCGATCGA ACATCCGGGC AGGTTCAGAA
AATCAAAAGG ATGGTGCTTA A
|
|---|
| Protein sequence | MTEQVRLQPL SIRARFALLL GIFAVAVGYG IVMPILPFVI ERLAMTADAT TLSRHTGFLA
GVYALAIFLF APAWGRVSDQ RGRRPVIVTG LVGFAITLGI FVLADSLPLL YVGRFLAGLF
AAAVAPAAYA LVCDHAPSDE WRAHRFALIN VAGAAGSFAG PTVGGMILQA RFAEAIAGRF
TSPVVAAVSV ALAAALAIQG LVPATAQRKD SEMAFAASAP GDRELVLRLC GLMFVTTAAV
SAFDVGLLLR GKQVLRMDAW QLGAMFAECG LVMLFVQAIV FSPLIKPQTT RWFLTPGLIA
LTAGLIAIPL ASSYVLTSVG IAVVAAGAGL VYPIVTYWVP LGSNGTRGAD LGRVTAAASL
GQALGSTAGG LLFDALILPN AVFSSAALMA LAGAGASIGL PRLLMPRDRI VRSNIRAGSE
NQKDGA
|
|---|
| |