Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_p0098 |
Symbol | |
ID | 5148555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009475 |
Strand | + |
Start bp | 74244 |
End bp | 76751 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640539019 |
Product | putative glucoamylase precursor |
Protein accession | YP_001220452 |
Protein GI | 148240951 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.519208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGCAA GGTGTTCTCC ACCCTCCCCG GGCAGGCCAG TGTGGGCCAC GATGAAAACC ATCCACCACG ATAATCACGG ACGTCTGGTG AGAACCAAAA CGGCCCCGGC GGTGGAAAGA CCGCGGGCCA ATCATTGGGA GCCAGATCCA AATCTTGACG CTCCGGGAGC GCCGGGCATC CCGCCGACTT GGACAAGCAG CAGCAAGGAT GTCGTCGGAT CGTCGCTTGG ACCTGCGCGC CTGTGGTTCA CGGTCGGTTA CGGGATCGTC AACGAGGTCT ACTGGCCTCG GGTCGATATT CCGCAAATTC GCGATCTCGG CTTTTTGGTT GCCGACGGGA AGGGATTTTG GGCGGAGGTC AAGCGACTTG GCAAATACGA ACTTCGAGCG GTCGCCGAGG GCGTTTCGGC CTACGAAGTC GTACACTCAC ATTCGCGCTT CTCGTTGCGT TTGCGGATCT GCCCCGACCC GCGACGGGAT GTGCTCGCGA TCGAATGTCG CCTTGAGACT GACGATCCGT CGTTGCGGCT ATACGCGTTG CTCGCACCTC ACCTCGGGGC GACCGGGTAT GGCAATCGCG CCATCATTGC CGAACAGCGC GGCCGGCGAT TCTTGGCCGC GGCACGCTCG CCGTTTGCGC TGGCGCTCGC CGCTGTCGAC GAATACCAGC AGGATGCCAT TATCCGGGCA AGTGCCGGAT ACGTGGGCGC CAGTGACGGA TGGCAGGATT TCGCTCGGAC GGGGGAGATG ACTTGGAATT ATCCTGCCGC AGGCCCGGGG AACGTCGCGC TGATGGCGGA ATTGCCGCAA AACAGCGTAT TGGCCCTGGG CTTTGCCACC ACCCCTGCAG CCGCGGCGAC ACTTGCTGTT TCATCGTTGA TGCAACCATT TGACCGACTG CTTAAGGCCC AGATCTCGGA TTGGACCAGT TGGCACCGCA GTTGCGGGGA GTGCTGCGCA AATCCGGTCG AATTGGCCCG GCCGCTGCGG GACCAATTTG TCACGTCCAC GACCGTGCTG CGCACGCATC TGGACAAAAC CTATCCCGGT GCCATGGTGG CGAGCCTCAG CATTCCCTGG GGCGACAGCG GGAACGAGCG AGGTGGCTAT CATCTGGTCT GGCCACGCGA TCTCGTCGAA TGCGCCTCCG CCTTGTTGGC CTTCGGCGGA GAAGCTGAAG CACGCGACAC GCTGCGTTAT CTAATTGCCA CACAGAACGT TGAAGGACAC TGGCAACAAA ACCAGTGGCT GGGGGGCGAA CCCTATTGGC GCGGTGTCCA GCTGGACGAA GCGGCCTATC CGGTGCTTCT CGCCGCACTG TTGGCTGACC GGGATGCGGT CGACGGCATC GAGCCGCAGG ACATGGTCCG GCGTGCGCTG GGATGCATCG CGCGTATTGG TCCCTCGACC GATCAAGACC GTTGGGAAGA AAACAGCGGT CTGAACGCAT TCACCTTGGC TACCTGTATC GCGGCCCTGG TCGCGGGCAG CGAATTGCTC GACGACAGGG CCCGGCACTG GGCCACGCAA CTCGCCGATT TCTGGAATGC CCGTCTCGAT ACCTGGCTGG TTGCCCCCGA CAGCGATTGG ACGAGGCAAT TGAACGTGCG CGGCCACTAT GTTCGCACCG CGCCAGGCTC CGTCCTGTCC AGACGAAGCC AAGCACTGAA CGAGTTGGTC GCGATCCGCA ACCGCGCCGA CGGAGCAAGC CTGCAGGCGA GCGCGCAGAT CAGCACCGAT TTCCTGCGCT TGGTTCGCTT CGGGCTACGC CACCCGCAGG ATCCCCTAAT CCTCGACAGC CTGAAAGTGG TAGATCATCT GCTTAGGGTT GAGACCCCAT CCGGCGTAGC TTGGCGTCGC TACAATGGCG ATGGCTACGG CGAGTACGAT GATGGCCGGC CTTACGATGG GGCTGGCAAA GGTCGGCCAT GGCCGCTCCT TGCGGGCGAA AGAGGTCATT ACGAGCTCTG CGCCGGCCAG GATTCCCTGC CAATGCTCGA AACCATGGTG GCTTCGGCCA GTCCGGGTGG AATGATCCCG GAGCAAATCT GGGACGGATC CTCGGTTCCG CAGCGGCGGC TCGAGCCAGG TCGCCCCACC GGCTCGGCCA TGCCGCTGGC CTGGGCCCAC GCGGAGTTCA TCAAGCTCGC GGTCTCGCGG CACTTGGGTC GGCCTGCCGA CAGACCAGAA GCGGTTTGGC GGCGCTATGG TGGTCAGCGC CGAACGGCCG ATCGCACGTT CTGGTGGCCG CATGCGCAAA TTGCGACGGT GGCCCGCGGC AGCCGCCTCA TCGTCGCCAT CGCCAGCGCT GGTACAGTGC ATTGGGGGAT CGATGGCTGG AACGGTGTGA ACGACGTCGA GGCTGAAGAC ACCGGTCTTG ATTTCTTTGC TGCTGAACTC GACACCTCAT CCCTGCGAGA TGGGCAATGG GTGGACTTCA CTATTCGCTG GCGCGACGGC AACTGGGCAG GCATCGATTA CCGCGTCGAA ATCAAGGCAG ACCCATAG
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Protein sequence | MTARCSPPSP GRPVWATMKT IHHDNHGRLV RTKTAPAVER PRANHWEPDP NLDAPGAPGI PPTWTSSSKD VVGSSLGPAR LWFTVGYGIV NEVYWPRVDI PQIRDLGFLV ADGKGFWAEV KRLGKYELRA VAEGVSAYEV VHSHSRFSLR LRICPDPRRD VLAIECRLET DDPSLRLYAL LAPHLGATGY GNRAIIAEQR GRRFLAAARS PFALALAAVD EYQQDAIIRA SAGYVGASDG WQDFARTGEM TWNYPAAGPG NVALMAELPQ NSVLALGFAT TPAAAATLAV SSLMQPFDRL LKAQISDWTS WHRSCGECCA NPVELARPLR DQFVTSTTVL RTHLDKTYPG AMVASLSIPW GDSGNERGGY HLVWPRDLVE CASALLAFGG EAEARDTLRY LIATQNVEGH WQQNQWLGGE PYWRGVQLDE AAYPVLLAAL LADRDAVDGI EPQDMVRRAL GCIARIGPST DQDRWEENSG LNAFTLATCI AALVAGSELL DDRARHWATQ LADFWNARLD TWLVAPDSDW TRQLNVRGHY VRTAPGSVLS RRSQALNELV AIRNRADGAS LQASAQISTD FLRLVRFGLR HPQDPLILDS LKVVDHLLRV ETPSGVAWRR YNGDGYGEYD DGRPYDGAGK GRPWPLLAGE RGHYELCAGQ DSLPMLETMV ASASPGGMIP EQIWDGSSVP QRRLEPGRPT GSAMPLAWAH AEFIKLAVSR HLGRPADRPE AVWRRYGGQR RTADRTFWWP HAQIATVARG SRLIVAIASA GTVHWGIDGW NGVNDVEAED TGLDFFAAEL DTSSLRDGQW VDFTIRWRDG NWAGIDYRVE IKADP
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