| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0087 |
|---|
| Symbol | |
|---|
| ID | 5148582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009475 |
|---|
| Strand | - |
|---|
| Start bp | 63383 |
|---|
| End bp | 63889 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640539008 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001220441 |
|---|
| Protein GI | 148240940 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.383416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTA CGAGGAAGAG TAGGTCACGC CACTCCTGCA TTCGCGATCA GGAGGTTGTC
AATCGCTTCA CCTGGGAGAT CGTGCACATC AATATCTACC TGATGAAGCT TTGCCAATTC
TGGGCCAAGG CGCTCAACAT CAGCGGGCCG CAATGGATGA TTCTGCTCGC CATATCCGAT
TTGGACGAGG GCGATGGCGT GCCCGTCAAT GCCGTGTCGA AGATGCTTCA GGTCGACTCA
TCGTTCGTCA CGACGCAGTC GAAGCGGCTG GAGAAGAGTG GGCTGTTGCA CCGCAACTCG
TCGCCGACTG ATGCTCGGGT GGTCCGGATG TCGCTCACGG ATCAATCCCA CGACCATCTA
TCACGGCTTG CCGCTCGGCA GGAAGCGATC GGCGCGCTTG CCTTCGAGGT ATTCGGTTCA
GACGAACTGG CGGAGTTTTT CGAGAAACTC TCAAACCTGA AGAGTCGGTT GGGAAAGGCG
CGTTTGAAGC TCTCGTTGGA TTTTTGA
|
|---|
| Protein sequence | MSATRKSRSR HSCIRDQEVV NRFTWEIVHI NIYLMKLCQF WAKALNISGP QWMILLAISD
LDEGDGVPVN AVSKMLQVDS SFVTTQSKRL EKSGLLHRNS SPTDARVVRM SLTDQSHDHL
SRLAARQEAI GALAFEVFGS DELAEFFEKL SNLKSRLGKA RLKLSLDF
|
|---|
| |