Gene BBta_p0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_p0062 
Symbol 
ID5148626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009475 
Strand
Start bp46832 
End bp47389 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID640538989 
ProductRNA polymerase sigma factor 
Protein accessionYP_001220422 
Protein GI148240921 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC TCGAAATCGA ACTCAAGGCT CTCATGCTTG CGAGCCTGGA CGGTAACTCT 
GCATCGCATC GCGTGCTGCT CGATCAGTTG AGCCGTCGGC TGCGTGCCTA CTACAAGGCT
AAGTTGGGCG CCGTCGGCAG GGGGGTAGCG GAGGCCGAAG ATTTGGTCCA GGAAGCCATA
TTCGCGATCC ACCTCAAGCG GCATACCTAT GATCCGAAGG AACCGCTCAC GCCTTGGATC
CACGCCATCG CGCGCTACAA GCTGATCGAT TTTCTGCGTC GGAATCACGC GTCGCGCGCG
GAGGTGCCGA TCGACGAGGC CGATGAAGTT ATGGCACATG ATGACAGTGC CGATGCCGAA
AGTACGCATG ACGCCCGGCG GCTGGTGGAG CGACTTCCCA AAGGCATGCA GTGCGCGATC
GAGGCGGTGA AACTTGATGG ATTGAGCGTA GCCGAAGCCG CGAGGAGATG CGGTCTCTCC
GAGTCTGGTG TAAAAGTGAA CATTCACCGC GGGATCAAAG CGCTCGCCGC GTTGGTTGCC
CGGGACACGC GAACATGA
 
Protein sequence
MTNLEIELKA LMLASLDGNS ASHRVLLDQL SRRLRAYYKA KLGAVGRGVA EAEDLVQEAI 
FAIHLKRHTY DPKEPLTPWI HAIARYKLID FLRRNHASRA EVPIDEADEV MAHDDSADAE
STHDARRLVE RLPKGMQCAI EAVKLDGLSV AEAARRCGLS ESGVKVNIHR GIKALAALVA
RDTRT