Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_p0062 |
Symbol | |
ID | 5148626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009475 |
Strand | + |
Start bp | 46832 |
End bp | 47389 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640538989 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001220422 |
Protein GI | 148240921 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACC TCGAAATCGA ACTCAAGGCT CTCATGCTTG CGAGCCTGGA CGGTAACTCT GCATCGCATC GCGTGCTGCT CGATCAGTTG AGCCGTCGGC TGCGTGCCTA CTACAAGGCT AAGTTGGGCG CCGTCGGCAG GGGGGTAGCG GAGGCCGAAG ATTTGGTCCA GGAAGCCATA TTCGCGATCC ACCTCAAGCG GCATACCTAT GATCCGAAGG AACCGCTCAC GCCTTGGATC CACGCCATCG CGCGCTACAA GCTGATCGAT TTTCTGCGTC GGAATCACGC GTCGCGCGCG GAGGTGCCGA TCGACGAGGC CGATGAAGTT ATGGCACATG ATGACAGTGC CGATGCCGAA AGTACGCATG ACGCCCGGCG GCTGGTGGAG CGACTTCCCA AAGGCATGCA GTGCGCGATC GAGGCGGTGA AACTTGATGG ATTGAGCGTA GCCGAAGCCG CGAGGAGATG CGGTCTCTCC GAGTCTGGTG TAAAAGTGAA CATTCACCGC GGGATCAAAG CGCTCGCCGC GTTGGTTGCC CGGGACACGC GAACATGA
|
Protein sequence | MTNLEIELKA LMLASLDGNS ASHRVLLDQL SRRLRAYYKA KLGAVGRGVA EAEDLVQEAI FAIHLKRHTY DPKEPLTPWI HAIARYKLID FLRRNHASRA EVPIDEADEV MAHDDSADAE STHDARRLVE RLPKGMQCAI EAVKLDGLSV AEAARRCGLS ESGVKVNIHR GIKALAALVA RDTRT
|
| |