Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3460 |
Symbol | |
ID | 5159165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009468 |
Strand | - |
Start bp | 174309 |
End bp | 175562 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640538773 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001220206 |
Protein GI | 148243967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.403632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCGT TAAATCCTGG ATCGTTAGAC CGTCGAGGGT TGCTTAAAGC CGCTGGTGCA ACCGGTGCTT CAAGCTTAAT TCTGCCAAAT ATCAGCTGGG CTGCCAGTGA GAAGCCAGTC AAAATCGGCA TGATCGATCC GCGTACGGGT ACATATGCGG CTGCTGGGTT TAGCGAGATT CATGGCGCAA CAATGGCTAT CGACGAGATC AACAAGAAGG GCGGCATTCT CGGCCGGCCC GTTCAGATGT TCGTTGAAGA TTCGGAAAGC CTGCCAGGTC CTGGAGTGAC GAAAGCGCAA AAGCTTGTTG CTGAGGACAA AGTCAATTTT CTGATGGGAG CAGTTAACTC AGCTACGGCA GAATCACTTA GTCAATTCGC ATTGCAGCAT AATATGCTCT ATATTGATAC TGGTGGTCAC GTAGATGACG TGACCGGCAG CAAATGTCAT TGGACCACAT TCCGCACCTG CTCGACCACA TGGATGCTTA CGGCCGGTGA CTTCGAGACC CTATTCAAAA AGTTTGGCAA GAAGTGGTTC TTTATTACAC CTGACTATGC TTTTGGTCAT GCTGAGCATA GGGATTATGT AAAGCAACTT CAGAAGGCGG GTGGCAAATC GGTAGGCAAT GCGCTTGCGC CACTCGGCAC CACGGACTTC TCCTCCTACC TGATCCGCGC CCGCGCCGCG AAGCCGGACG TGCTGATCTG CCTGCAGGCG GGCGACGACC TCGTGAACCT GCTGAAGCAG GCCGTGCAGT TCGGCCTCGA CAAGCAGATG GCGATCGCCG GCGCGCTGCA GGAAATGGAG GTCTTAGAGT CTCTTCCGAA GGCAGCCCTT CTCGGCTGGT GGACCTTCGA GTGGTACTGG AACCAGCCCG GCGTTCCCCA CGTTGCCGAC TTCGTCACGG CATATAAGCG TCGATTTGGT GACAAAGTCC CAACCGCTCG GTCTTGGTTC GGTTATGTAA GCGCTCATTC CATCGCCCTT GCGGCGAATC AGGCGAAGAC GCTCGACTCG CTGAAGGTGG TCAAGGCGCT CGAAGGCATG GAACTGCCGC CGGAGATCGC GCTGCAGCCG GGCAAGGTGC ACTACCGCGC CGGTGACCAT CAGATGATGG CGAACATGTT CCCCGGCTAC GTCCCCAAGG ACGCGAGCTA TCCGAACCTG TTCAAGGTGG CCGACGTGGT GCCGAGCGAG AAGATCGCCC TGTCGCCGGC CGCCGCCGGC TGCAAGATGA CGTACCCGAG CTGA
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Protein sequence | MKSLNPGSLD RRGLLKAAGA TGASSLILPN ISWAASEKPV KIGMIDPRTG TYAAAGFSEI HGATMAIDEI NKKGGILGRP VQMFVEDSES LPGPGVTKAQ KLVAEDKVNF LMGAVNSATA ESLSQFALQH NMLYIDTGGH VDDVTGSKCH WTTFRTCSTT WMLTAGDFET LFKKFGKKWF FITPDYAFGH AEHRDYVKQL QKAGGKSVGN ALAPLGTTDF SSYLIRARAA KPDVLICLQA GDDLVNLLKQ AVQFGLDKQM AIAGALQEME VLESLPKAAL LGWWTFEWYW NQPGVPHVAD FVTAYKRRFG DKVPTARSWF GYVSAHSIAL AANQAKTLDS LKVVKALEGM ELPPEIALQP GKVHYRAGDH QMMANMFPGY VPKDASYPNL FKVADVVPSE KIALSPAAAG CKMTYPS
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