Gene Acry_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3460 
Symbol 
ID5159165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp174309 
End bp175562 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content56% 
IMG OID640538773 
Productextracellular ligand-binding receptor 
Protein accessionYP_001220206 
Protein GI148243967 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.403632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGT TAAATCCTGG ATCGTTAGAC CGTCGAGGGT TGCTTAAAGC CGCTGGTGCA 
ACCGGTGCTT CAAGCTTAAT TCTGCCAAAT ATCAGCTGGG CTGCCAGTGA GAAGCCAGTC
AAAATCGGCA TGATCGATCC GCGTACGGGT ACATATGCGG CTGCTGGGTT TAGCGAGATT
CATGGCGCAA CAATGGCTAT CGACGAGATC AACAAGAAGG GCGGCATTCT CGGCCGGCCC
GTTCAGATGT TCGTTGAAGA TTCGGAAAGC CTGCCAGGTC CTGGAGTGAC GAAAGCGCAA
AAGCTTGTTG CTGAGGACAA AGTCAATTTT CTGATGGGAG CAGTTAACTC AGCTACGGCA
GAATCACTTA GTCAATTCGC ATTGCAGCAT AATATGCTCT ATATTGATAC TGGTGGTCAC
GTAGATGACG TGACCGGCAG CAAATGTCAT TGGACCACAT TCCGCACCTG CTCGACCACA
TGGATGCTTA CGGCCGGTGA CTTCGAGACC CTATTCAAAA AGTTTGGCAA GAAGTGGTTC
TTTATTACAC CTGACTATGC TTTTGGTCAT GCTGAGCATA GGGATTATGT AAAGCAACTT
CAGAAGGCGG GTGGCAAATC GGTAGGCAAT GCGCTTGCGC CACTCGGCAC CACGGACTTC
TCCTCCTACC TGATCCGCGC CCGCGCCGCG AAGCCGGACG TGCTGATCTG CCTGCAGGCG
GGCGACGACC TCGTGAACCT GCTGAAGCAG GCCGTGCAGT TCGGCCTCGA CAAGCAGATG
GCGATCGCCG GCGCGCTGCA GGAAATGGAG GTCTTAGAGT CTCTTCCGAA GGCAGCCCTT
CTCGGCTGGT GGACCTTCGA GTGGTACTGG AACCAGCCCG GCGTTCCCCA CGTTGCCGAC
TTCGTCACGG CATATAAGCG TCGATTTGGT GACAAAGTCC CAACCGCTCG GTCTTGGTTC
GGTTATGTAA GCGCTCATTC CATCGCCCTT GCGGCGAATC AGGCGAAGAC GCTCGACTCG
CTGAAGGTGG TCAAGGCGCT CGAAGGCATG GAACTGCCGC CGGAGATCGC GCTGCAGCCG
GGCAAGGTGC ACTACCGCGC CGGTGACCAT CAGATGATGG CGAACATGTT CCCCGGCTAC
GTCCCCAAGG ACGCGAGCTA TCCGAACCTG TTCAAGGTGG CCGACGTGGT GCCGAGCGAG
AAGATCGCCC TGTCGCCGGC CGCCGCCGGC TGCAAGATGA CGTACCCGAG CTGA
 
Protein sequence
MKSLNPGSLD RRGLLKAAGA TGASSLILPN ISWAASEKPV KIGMIDPRTG TYAAAGFSEI 
HGATMAIDEI NKKGGILGRP VQMFVEDSES LPGPGVTKAQ KLVAEDKVNF LMGAVNSATA
ESLSQFALQH NMLYIDTGGH VDDVTGSKCH WTTFRTCSTT WMLTAGDFET LFKKFGKKWF
FITPDYAFGH AEHRDYVKQL QKAGGKSVGN ALAPLGTTDF SSYLIRARAA KPDVLICLQA
GDDLVNLLKQ AVQFGLDKQM AIAGALQEME VLESLPKAAL LGWWTFEWYW NQPGVPHVAD
FVTAYKRRFG DKVPTARSWF GYVSAHSIAL AANQAKTLDS LKVVKALEGM ELPPEIALQP
GKVHYRAGDH QMMANMFPGY VPKDASYPNL FKVADVVPSE KIALSPAAAG CKMTYPS