Gene Acry_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_3406 
Symbol 
ID5159276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009468 
Strand
Start bp124229 
End bp125566 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content61% 
IMG OID640538722 
Productmajor facilitator transporter 
Protein accessionYP_001220155 
Protein GI148243916 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAT ACGCAGATAC CGCCCGGCCT GACGCACTCG CGGTGCCGAT CGAAGAGCGC 
CGCCGCGCCG CGATCCGCGG GGCTTTCTTT TCCGAATACA TCGACATGTT CGATATATAC
GTGCCGATCG TGGTGCTGAC GCCGGTGCTG TTCTTTTTTC AGCCCGCGCA CTTGCCGCCC
GGCGAGGAGG CACTGCTGGC GTCGCTGGTG TTCATCACCA CCCTGCTTGG CCGGCCGATC
GGCGCGTTCT TGTTCGGGCT GGTTGCCGAC CGGATCGGCC GGCGGATGGC GTCGATCTAT
TCGGTGTCGG GCTTCGGGCT GATTACGCTG CTGATCGCGG CGCTGCCAGG CTACCAGAGC
ATCGGCGTCG CCTCGTACTG GCTGCTGGTG CTGCTACGCT TTCTCGACGG CATCTGCCTC
GGCGGTGGCT ATACCGGGGC GATGCCGCTC GCAATGGAGT ATTCGCGCAA GAGCGAGCGC
GGCTTCGCCG GCGGGCTGAT ACTCGCCGCT TTTCCGGCTG CCTATGTCAC GATCAACCTA
GTCGCGATGG CGGTGTTTGC TCTGGTGCCG TTGCATGGTC TCGATTCGCC CTATGCCCAG
TGGGGTTGGC GCATACCGTT TGTGATCGGC GCGGCGCTCG CCGGGATGCT GGTGCTTTAC
TATGTGTTCA AGGTCTCCGA ATCGGAAATC TGGATTACCG AAACGGCCGA GGGCACGCAG
AAACTGCCGC TCACTGACCT GATCGCTGGG CGGAGCGGGC GCAACCTGCT GCAGGTGCTG
CTGTTGATGA CCGGCTTCTG GCTCACCCAA AACCTCATTA CCATCTTCAT TCCGGCAACG
TTGCTATTCC ACTTCCTGCA TCTGTCGAAA TTCCAGCTCA CCTCGACACT ACTGATTTCC
TACGCACTGC TATTCTTCAG CTACATCGGT TCGGGCATGC TGGGGCAGAA GGTTGGACGG
CGGCGCTTTT TCGTAGTCGC TGGGCCGCTG ATCGCAACCG TTGGCGCGGC GATCATGTAT
GTTCTGGTCG GCGTGCCGGG CCTTTCGCTG CCGATGATCA TCGTGCTGGT CTGCGTGCTC
TCGATCTTGG TAACCTCGCC CTGGGGAGTT ATCGTCACAT ATATTAACGA GCGGTTTGCT
ACAGACGTGC GGGCAACAGG ATTCGGTGTC GGCTTCAGCC TTTCCGTCAT CATCCCGTCC
TTCTACGCCT TCTACATGAG CTGGCTCGGC TATCTGATGC CGTTCCGCTA CACGCCGGTG
GTTCTGCTAG TTATCGGCGG CTTGATCGGC ATGGTCGGCG CGCTGCTCGG GCCGGAAACC
CGGGATGTGG ATTTTTGA
 
Protein sequence
MASYADTARP DALAVPIEER RRAAIRGAFF SEYIDMFDIY VPIVVLTPVL FFFQPAHLPP 
GEEALLASLV FITTLLGRPI GAFLFGLVAD RIGRRMASIY SVSGFGLITL LIAALPGYQS
IGVASYWLLV LLRFLDGICL GGGYTGAMPL AMEYSRKSER GFAGGLILAA FPAAYVTINL
VAMAVFALVP LHGLDSPYAQ WGWRIPFVIG AALAGMLVLY YVFKVSESEI WITETAEGTQ
KLPLTDLIAG RSGRNLLQVL LLMTGFWLTQ NLITIFIPAT LLFHFLHLSK FQLTSTLLIS
YALLFFSYIG SGMLGQKVGR RRFFVVAGPL IATVGAAIMY VLVGVPGLSL PMIIVLVCVL
SILVTSPWGV IVTYINERFA TDVRATGFGV GFSLSVIIPS FYAFYMSWLG YLMPFRYTPV
VLLVIGGLIG MVGALLGPET RDVDF