Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3305 |
Symbol | |
ID | 5159100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009468 |
Strand | + |
Start bp | 16945 |
End bp | 17709 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640538626 |
Product | ABC transporter related |
Protein accession | YP_001220059 |
Protein GI | 148243820 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.11679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAGC ACTTGTCATC CGTGCGCCCG CCGCGCATCG AGTTGCGAGG GGTCTGCAAG CATTTCGGCC GGGCCGCGAC GCGGGTTGAC GCGTTGGTCG ATATCACACT CACGGTGCAT GCGGGAGAGA TGGTGGGCTT GCGGGGGCCA TCCGGTTGCG GGAAGAGCAC GCTGCTCAAC GTGATTGGGT GCGTGACCGA GCCATCTGGC GGCTGGATGC GGCTTGACGG TGAGCCAGTG TACGAGAACC GCTTCCTGCG TCGGGACCTG CGCCGGCTGC GCCTCACAAG GATCGGCTTC ATCTTCCAGA CACACAATCT GCTGCCGTTC CTGACTGCGA CCGAGAACGT CGCGGAGGCG ATGGAGTTGG CGGGAACCGG GCACGCGAAC GCGCGGAAAC GTGCCGAGGC GTTGCTCGAT TACTTCGACA TGCGCCAGGT GCACGCTTAT CCGTCAGAGC TTTCCGGCGG CATGGCGCAA CGCGTTGCGA TCGCTCGCGC AATCGCCAAT GGTCCGCACA TTATCCTCGC CGATGAGCCG ACCGCGCCCC TGGACTCAGT TCGCGCCGAT GGCGTGATGA ACCTTCTCGA ACGGATAGCG AAGGACCAGC TGGCGGCAGT GCTCGTGGTC ACGCACGATG AATCGATCTT CCACCGCTTC GATCGGCTGA TCGCCATGCG AGACGGACGG ATCGAAGGTG AAGAATTGCC GGGGCATCCG GCCCTCACCT CATCGATGAC GGGCCTCGGA CGTGATGCTT CCTGA
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Protein sequence | MDEHLSSVRP PRIELRGVCK HFGRAATRVD ALVDITLTVH AGEMVGLRGP SGCGKSTLLN VIGCVTEPSG GWMRLDGEPV YENRFLRRDL RRLRLTRIGF IFQTHNLLPF LTATENVAEA MELAGTGHAN ARKRAEALLD YFDMRQVHAY PSELSGGMAQ RVAIARAIAN GPHIILADEP TAPLDSVRAD GVMNLLERIA KDQLAAVLVV THDESIFHRF DRLIAMRDGR IEGEELPGHP ALTSSMTGLG RDAS
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