Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3248 |
Symbol | |
ID | 5158953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009467 |
Strand | - |
Start bp | 161021 |
End bp | 161698 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640538574 |
Product | transposase |
Protein accession | YP_001220007 |
Protein GI | 148243767 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.136244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGTGG AGCGGATTGC GATGCGCGAT GTGCGCGAGA TTGTCAGATT GAGGATGGCG GGGCTTTCGA CCCGCCAGGT GGGGATCCGG GTCGGGGTTG CGGCATCGAC GGTGCGCTTG ACGCTGCGGC GACTGGAGGC GGCCGGGCTC GATGGGCCAG GGGCTCTGGC GCTGTCCGAG GCGGCCTTGG AAAGGCGCTT GTTCGAAGGC TCGGCGGGCA AGCGGCCGGG GCATCGACGT GTGGATGAGC CGGACTGGGG GCGTATCCGC CGCGAGTTGC AGCGCAAGCA CGTGACGCTG TCGATCCTGT GGGACGAGTA TATCGCCGAG CACCCGGACG GGTATCGCTA CAGCCGGTTC TGCGAGCTCT ACCGGAGCTG GGAAGCCCGG CTGCCGGTGA CGATGCGCCA GACCCACGCA TCGGGCAAGA AGCTGTTCGT CGATTATGCA GGCGACACAG TGCCGGTGGT GATCGACCGG CTCACCGGCG AGACGCGTGC GGCCCAGATC TTCGTCGCCG TTCTCGGCGC ATCGAGCTTC ACCTATGCTG AGGCGACCTG GACCCAGACC CTGCCGGACT GGATCGAGGC GCATAATCGC ACTCTGGCAG CAATTGGCGG CGTGCCGGCG CTGCTGGTGC CGGCACTGTC AGGAATTCCG TGTATGGGCG GCGGTTGA
|
Protein sequence | MPVERIAMRD VREIVRLRMA GLSTRQVGIR VGVAASTVRL TLRRLEAAGL DGPGALALSE AALERRLFEG SAGKRPGHRR VDEPDWGRIR RELQRKHVTL SILWDEYIAE HPDGYRYSRF CELYRSWEAR LPVTMRQTHA SGKKLFVDYA GDTVPVVIDR LTGETRAAQI FVAVLGASSF TYAEATWTQT LPDWIEAHNR TLAAIGGVPA LLVPALSGIP CMGGG
|
| |