| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3108 |
|---|
| Symbol | |
|---|
| ID | 5158975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009467 |
|---|
| Strand | + |
|---|
| Start bp | 4361 |
|---|
| End bp | 5737 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640538446 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_001219879 |
|---|
| Protein GI | 148243639 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA CGTCCCGACA CCTCCGTTTC AGACCCAGCC GCGTCGGTGC TCTTGCGCTT
GCGACACTGC TTGCCGGCTG TGCGCGGTAT CAGCCGGCGC CGTTGCATCC CGGTACTTCG
GCCACGGCAC TGCTCGGCCG CCGTCTCGAC GAGCCGGCGC TTGGCCAATT CCTCGCGGCT
ATGGGCGTGC ATCCGCGCGG ACACTGGGGA TTGCGGGCTC TGACGCTCGT CGCCGTCTAT
GAGCGGCCAG ATCTGCGGAT CAGCGTCGCC GCCTATAACG CCGCGAAGGC GGCGGTGACG
ACGGCCCAGC AGATCCCGAA CCCCACGCTT TCCCTCGCGC CCAGCTTCAA CGCGACGCAA
GCCTTCCCTT CGCCAATCAA GATCGGGCCG GTCATCAGTT TTCTCGTCTC CAATCTCGGT
GCTCGCGAGG CTGGCATCGC CGCCGCGCGG GATCGCCAGC AAGCCGCGCG AATACTCATC
GCTGCCGCGG CATGGCGGGA ACGCAGCAAC GTCCGCAACG CGCTGCTCAC ACTCTGGCTC
GATGAACGGA TCGCCAGGAT CAAGGCGCGC GTCGCCAGCT ATGCCGCGAC AGCGTCCCGC
CTCGTAGCAC AGCGCGTGAC CTCTGGGATG CTTGCTGATA CCGTGCTCGC CAGCACAACC
GAGGCGGCGA ACAAGGCAAG CTTTGGCGCC GCTGAAGCGC GGGTCCAGAT CGGAATGGAC
CGGGCCCACT TGGCCGCTGC GATCGGAATG CCGGCGGCGG CGCTTCGAGG TAAGCACCTT
TCATTCACCG CCTTTGAGCA TCCGTTGCCG CCGGCCAATC TCGCCGCTCT TACACGCACG
GCGCTGGTAA CCAGTCCATC AGTCGTCGGG GCCTACAAGA ATTATCGCGC GGCCGACGCT
TCTCTCCGCA AAGCGATCGA CCAGCAGTTT CCAGGCTTTC GTATTGGCTC CGGGTATCAC
TACGATCAGG GCGCTAGCAA GTTCATACTT GCCCTCTCGC TGCCGCTGCC AATTCTCAAC
CAGAATCAGG GCCCGATCGC CGAGGCGCGT GCAAGGCGCC AGCTTGCGGC GGCCCTGTTC
GATCGGGCGC AGGTGCGCGT TCTCCACGAG ATCGACGCAG CCAAGGCCGC TCTGCAAGGC
AGCGTGAGCG TTGCGCGCGC GGCACGGCTA CTCCTCGCAA CCGCCCGCGA GCGCGAACGC
CAGGCTATTG AAGCTTACCG CGCCGGTGCG ACCGGCCAGC TGCGCATGGT CGAGGCCGAA
CAGCAGGCAA CCCTGGTCCG CGAACAGGAG CTGACCACGG ATGCTCAGCG ATTACGCGCC
CTCGCAGCCC TGGCCGACGC GCTCCATCAC CCCATTTTCC GGGAGAGCCA CTCATGA
|
|---|
| Protein sequence | MKKTSRHLRF RPSRVGALAL ATLLAGCARY QPAPLHPGTS ATALLGRRLD EPALGQFLAA
MGVHPRGHWG LRALTLVAVY ERPDLRISVA AYNAAKAAVT TAQQIPNPTL SLAPSFNATQ
AFPSPIKIGP VISFLVSNLG AREAGIAAAR DRQQAARILI AAAAWRERSN VRNALLTLWL
DERIARIKAR VASYAATASR LVAQRVTSGM LADTVLASTT EAANKASFGA AEARVQIGMD
RAHLAAAIGM PAAALRGKHL SFTAFEHPLP PANLAALTRT ALVTSPSVVG AYKNYRAADA
SLRKAIDQQF PGFRIGSGYH YDQGASKFIL ALSLPLPILN QNQGPIAEAR ARRQLAAALF
DRAQVRVLHE IDAAKAALQG SVSVARAARL LLATARERER QAIEAYRAGA TGQLRMVEAE
QQATLVREQE LTTDAQRLRA LAALADALHH PIFRESHS
|
|---|
| |