Gene VC0395_A2836 details

Gene Information

• Locus tag: VC0395_A2836
• Symbol: mreD
• ID: 5135601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 2986217
• End bp: 2986705
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640534280
• Product: rod shape-determining protein MreD
• Protein accession: YP_001218686
• Protein GI: 147673051
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.00169793
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAGCA GTGATATTAA AGGCCGCATG GTCATTCTTG CCTCATTTTT ACTGGCGCTG 
ATTTTGCAAA CCATCCCATG GCCGGGAACC TTAGATCTGT TCCGGCCACC TTGGCTGCTG 
CTGGTCTGTT GTTACTGGGT ATTGGCACTG CCGCACCGAG TGAATGTCGG CAGCGCTTTG 
GTCATGGGCT TATTGTGGGA TCTGTTACTC GGTTCCACCT TAGGTATTCG CGGCATGATG 
ATGTCGATCA TCATCTATCT GGTCGCGATG AATTTCTTGG TACTGCGCAA CATGGCTCTA 
TGGCAGCAAG CGATTGTGAT TGGTTTGCTG TCGATGGGAT TGGAAGTGCT GATTTTCTGT 
GGTGAGTACC TGATCCAGAA TGTGACATTC AATCCGTTGT CACTCTGGAG TGGAGTGATT 
GCCTGTATAC TTTGGCCGTG GATGTTTTTA TTACTGCGCC GAGTTCGACG CCATTGGCAT 
GTGAAATGA 

 

Protein sequence

MLSSDIKGRM VILASFLLAL ILQTIPWPGT LDLFRPPWLL LVCCYWVLAL PHRVNVGSAL 
VMGLLWDLLL GSTLGIRGMM MSIIIYLVAM NFLVLRNMAL WQQAIVIGLL SMGLEVLIFC 
GEYLIQNVTF NPLSLWSGVI ACILWPWMFL LLRRVRRHWH VK