Gene VC0395_A2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2661 
Symbol 
ID5136161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp2816397 
End bp2817074 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID640534109 
Producthypothetical protein 
Protein accessionYP_001218539 
Protein GI147674414 
COG category[S] Function unknown 
COG ID[COG3295] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.522386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGGC AAGTCAAAGG GGATAACCAC AGGAGAGCTG GCCTAACGGC CAGCTTGATT 
ATGCAACGTC GACGCCTGCC TCTACACAAC AATAAATGGA TCCGCCGCCT TCATGCATGG 
TGCGGCTTCT TTACCCTACT CTTAATGCTG TTGTATGGCC TCACTGGCCT TTGGTTATCT 
CACCGCGCTG TCTGGCCACT GCCCGGGCCA CACACCAGCA AAAGTGAATG GCAACTCTCG 
CTCACTGAAC CCATCGATTC AGTCAGCACT TTTCAAGCGC AGCTCAATAC CGAATATGGC 
GAACATGAGT GGACGATACG CGAAATCGCC GCGCAGCAGT TGCCCACGCC ACAACAGCCG 
TTATTGATCC CAGCCCGCTG GGAAGCGCGC GCCACCAGCG TGACCGATAC CTTTAGCGCC 
CAATACGTGC CCGGTACCTT AGTCATTCAA GCTCAGCATC AAAAAGCCAA CTGGGCCGCT 
GTGCTTAACC GCTTGCATCG CGGAATGGGA ACGGGTCTTG GCTGGCAGTT GTTTTCCGAC 
CTTGCGGCGG TTGCCATGCT CCTGCTTGCC CTGACCAGTT TACTGATGTG GACCAAACTC 
CACGGCTCCC CGAAACGAGC AGGATGGCTA TTGATAGGTG GCAGTGTCGC GACCACACTG 
TTCGCTATCT TTGGTTAA
 
Protein sequence
MQRQVKGDNH RRAGLTASLI MQRRRLPLHN NKWIRRLHAW CGFFTLLLML LYGLTGLWLS 
HRAVWPLPGP HTSKSEWQLS LTEPIDSVST FQAQLNTEYG EHEWTIREIA AQQLPTPQQP 
LLIPARWEAR ATSVTDTFSA QYVPGTLVIQ AQHQKANWAA VLNRLHRGMG TGLGWQLFSD 
LAAVAMLLLA LTSLLMWTKL HGSPKRAGWL LIGGSVATTL FAIFG