| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2656 |
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| Symbol | |
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| ID | 5137096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2808467 |
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| End bp | 2810092 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534104 |
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| Product | DNA-binding transcriptional activator CadC |
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| Protein accession | YP_001218534 |
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| Protein GI | 147674140 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGTGGTG CTCGAGCATA TTCTGCCTCT TACCGATGCT ATCTTCCTGA TACAAAGAGC
TATTCTATGA TTGGAATCTG TTTTCAAATC AATGACTGGG TTCTGTGCAT TGATGAGAAT
AAGCTGTATC GCCAAGATAG GGAGGTCTCG GCCGAGCCGC GTCTTATTAA CTTGCTGCAT
TTTCTTGCGG AGCATGCCGG AGAGGTATTC GGCCGTGAGG AACTCATTCA ACATGTCTGG
GACGGGGCGA TTGTCACCGA CCAAGTGGTC ACTCAATCCA TTTTTGAGTT GCGTAAGCTA
TTGCGCGATG GACGCGAAGA AAACCTCAGC TATGTGGTGA CGGTGCCTAA GCGTGGCTAT
AAGTTAGTCG CGAATGTGCA GCGTCTCGAT GGCAATCCCT ATGTTTCTCG CCAAGAAGAG
TCGACAGCCA GTGATGTCTG TTTGGCGGAC GATATCGACG ACGTGGAAGA CGCCGTTCCC
GAGATCGTAT TTCCTGCCGG CCCGTTAACG CGCGCTGTAT GCCAAAGTCA GCAGCCGAAG
AAATCAAGCA AGCCGAATGT GAGCCGTTGG CGCTTAAATC TGCTCAATGC GATCTGGATT
GGCTTAGTGA TTGTAGCGAT GGGCTTTTTT ACTGTGCAGC AGTCGCAAGT GCGCATCACT
CAAGTGGTGG ATACCCATCT GATTGAATTT AAATTCCAAG ACGGTTTTCA TGCTCAGGCG
CTCACGCATG AGCTTGCCGA TGGTATCGCA CAAAAGCTGA TGGCCGATCT GACCCAAGTG
AGTGATTATC GGGTGATTCT CGGTAAAACG GCTTACAGCT CAGGCATTTT GCCCGGTAAG
TCAATCATGG TGCGAGTCAA TGACAAAGAC GGCCATGAGT TTTTAGATCT TGAGCTTAAG
AACAACTCTT CCGATGCGGT GCTGTTTAGT CGCCAATACC CGCTCGATAG CCAGCATCTG
GCCTCTGTGC TGAAAAGTGC CGAGTGGGAT GTAATGCAAG CGTTGAAAAT CCCGAATGCA
GAGCAGCAAG CACAGCGTTT GTTGGTGGAT TTTCCGCGTC AACCTGCGGC GTTAGGGCTG
TATGTGCGCG CCAATCATTA TTTGAACGTT GCCGATCGTC AGCAGTTCCA AAAAGGCATT
TATTTATTGG AGCAAGTGCT GAAATTAGAG CCGGACAACC ATTATGTCCA AGCCGAATTA
CTGATTGCCT ACCATGTGCA GCAAGCGCTC AGCCCAGATC AGGCGCTCAA TCAAGATCGC
ATGCTGGTGT TGAGTGAGCA GTTGCAGCAG GTGAGTTATT CCCCTCAAGC GGTAGTGCAG
CCACGCATTT ATGAGGCGTT AGCACTGCAA GCGACAGTCG AAAACCAAGT GGAAGCGGCC
ACGCGCTATT TGGCGCAAGC TCAGGGTTTG CGGGAATCGG TGCTTTCATA TGTGCTGCAA
GGCAAGCACG CTGAACTCAA AGGCGATCTG GATGGCGCAA GCGATGCCTA CAGTGAAGCG
TTTTATATGG ACACGTCGCT GGAAACTTAT CTGCTGTGCG AAAACTTGGT GTTCCACTCC
AACTTAAAAT CCATTGATTA CGCCATGTAC CGCTCGGTGC ATCCTTCGGT GGTTCGTTTA
CTGTAA
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| Protein sequence | MCGARAYSAS YRCYLPDTKS YSMIGICFQI NDWVLCIDEN KLYRQDREVS AEPRLINLLH
FLAEHAGEVF GREELIQHVW DGAIVTDQVV TQSIFELRKL LRDGREENLS YVVTVPKRGY
KLVANVQRLD GNPYVSRQEE STASDVCLAD DIDDVEDAVP EIVFPAGPLT RAVCQSQQPK
KSSKPNVSRW RLNLLNAIWI GLVIVAMGFF TVQQSQVRIT QVVDTHLIEF KFQDGFHAQA
LTHELADGIA QKLMADLTQV SDYRVILGKT AYSSGILPGK SIMVRVNDKD GHEFLDLELK
NNSSDAVLFS RQYPLDSQHL ASVLKSAEWD VMQALKIPNA EQQAQRLLVD FPRQPAALGL
YVRANHYLNV ADRQQFQKGI YLLEQVLKLE PDNHYVQAEL LIAYHVQQAL SPDQALNQDR
MLVLSEQLQQ VSYSPQAVVQ PRIYEALALQ ATVENQVEAA TRYLAQAQGL RESVLSYVLQ
GKHAELKGDL DGASDAYSEA FYMDTSLETY LLCENLVFHS NLKSIDYAMY RSVHPSVVRL
L
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