Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A2535 |
Symbol | |
ID | 5137296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 2688363 |
End bp | 2688995 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640533986 |
Product | hypothetical protein |
Protein accession | YP_001218428 |
Protein GI | 147673536 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000701111 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTTC ATCCCTACCT CATTCCCATG GCTTCTGTTC GGTTTGAAGA AGAGATTAAA AAGAGTCTGT TTATTACCTA TTTGGCACAT ACGCCAGATC TTGCCAGTGC CAAAGCGTTT GTTGATGAGA TTAAGCAGCG TCATGCGGAT GCGAGACACA ACTGCTGGGC GTTTGTGGCT GGGCGACCTG AAAACTCCAT GCTGTGGGGA TTGAGTGATG ATGGTGAGCC ATCCGGTACT GCGGGAAAAC CCATCTTGGC TCAGCTCACG GGGTCTCATA TCGGCGAAAT TACGGCGGTA GTGACCCGTT ATTATGGCGG TGTTCTATTG GGAACCGGTG GCTTAGTGAA AGCGTATGGT GGCGGTGTGC AACAAGCGCT CAAGCGACTT CAAACTATTG AGAAAAAAAT CACCACATCT GTGCACCTGA CGCTAGACTA CGCCATGATT CCATTACTCC ATTCCATAAT GGCGCAATTT TCTGCGACGG AAATGGAGGC TCACTATAAT GAACAAGTCG AAATGGTGGT GGAATTAGAG GCATTGCAAT CAGATGCTTT CACACAAGCC TTGATCAATA AAAGTGGCGC GAAAATACAG GTGAGTCGCT CACCACAACA TAGTCAGAAT TAG
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Protein sequence | MNLHPYLIPM ASVRFEEEIK KSLFITYLAH TPDLASAKAF VDEIKQRHAD ARHNCWAFVA GRPENSMLWG LSDDGEPSGT AGKPILAQLT GSHIGEITAV VTRYYGGVLL GTGGLVKAYG GGVQQALKRL QTIEKKITTS VHLTLDYAMI PLLHSIMAQF SATEMEAHYN EQVEMVVELE ALQSDAFTQA LINKSGAKIQ VSRSPQHSQN
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