| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2500 |
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| Symbol | avtA |
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| ID | 5137112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2652777 |
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| End bp | 2654033 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533951 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_001218393 |
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| Protein GI | 147675432 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTATT CCTCTTTTGG CGAAAAGTTT AATCGCTACT CCGGTATTAC CCAGTTAATG
GATGATTTGA ACGATGGTCT GCGCACTCCA GGCGCGATCA TGCTTGGTGG CGGTAATCCT
GCTGCCATCC CTGCCATGCT CGATTATTTC CATAACACCA GCGCCGAAAT GTTGGCCGAT
GGTTCACTGC TCAATGCCAT GACCAATTAC GATGGTCCAC AGGGCAAAGA TGTGTTTGTA
AAATCGCTCG CTACACTGCT GCGTGAGACG TATGGCTGGA ATATCAGCGA AAAGAACATC
ACCTTGACCA ACGGCAGCCA GAGTGGCTTT TTCTACCTGT TTAACTTGTT TGCCGGTAAA
CAGCCCGATG GTGCACACAA AAAAATCCTC CTACCCCTCG CGCCCGAATA CATTGGCTAC
GGTGATGCTG GCATTGATGA CGATATTTTT GTCTCCTACC GTCCGGAGAT TGAGCTGCTC
GATCAAGGAC TGTTCAAATA CCATGTGGAC TTTTCTGAGC TGAAAGTCGA TGAATCGGTG
GCCGCGATCT GTGTGTCTCG CCCCACCAAC CCAACCGGTA ACGTGTTAAC CGAAGAGGAA
ATCCACAAAC TCGACCAACT GGCACGTGAT AACGGTGTGC CGTTAATTAT CGACAATGCT
TACGGCGTGC CATTCCCGAA TATCATTTTT GAAGACATTG AACCGTTTTG GAATGACAAC
ACCATCTTGT GCATGAGCCT ATCCAAACTG GGCTTGCCCG GTCTGCGCTG CGGCATTGTG
ATCGCCAATG AAGCGGTAAC TCAAGCGCTG ACCAACATGA ATGGCATCAT TAGCTTAGCA
CCCGGCAGTA TGGGACCCGC ACTGGTGCAA CGCATGATAG AAAAAGGCGA TCTGCTGAGA
CTTAGCGAGC AGGTGATCAA GCCGTTTTAT CGCCAAAAAG CGCAACATGC GGTAGAGCTG
CTGCAAAGTG CGATTACGGA TCCGCGTTTT CGCATCCATA AACCCGAAGG GGCGATCTTC
CTCTGGCTGT GGTTTGATGA ACTGCCGATC ACCACAATGG AGCTTTACCA ACGTTTGAAA
GCGCGTGGGG TATTGATTGT ACCGGGCGAA TATTTCTTTA TCGGCCAGCC GCAAGAATGG
CCACACGCTC ATGAGTGCTT GCGTATGAAC TATGTGCAGA ACGAGCAAGC GATGGAACAA
GGCATTGCCA TCATCGCCGA AGAAGTACAA AAAGCGTATC AACAAGCCAA CGTCTAA
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| Protein sequence | MQYSSFGEKF NRYSGITQLM DDLNDGLRTP GAIMLGGGNP AAIPAMLDYF HNTSAEMLAD
GSLLNAMTNY DGPQGKDVFV KSLATLLRET YGWNISEKNI TLTNGSQSGF FYLFNLFAGK
QPDGAHKKIL LPLAPEYIGY GDAGIDDDIF VSYRPEIELL DQGLFKYHVD FSELKVDESV
AAICVSRPTN PTGNVLTEEE IHKLDQLARD NGVPLIIDNA YGVPFPNIIF EDIEPFWNDN
TILCMSLSKL GLPGLRCGIV IANEAVTQAL TNMNGIISLA PGSMGPALVQ RMIEKGDLLR
LSEQVIKPFY RQKAQHAVEL LQSAITDPRF RIHKPEGAIF LWLWFDELPI TTMELYQRLK
ARGVLIVPGE YFFIGQPQEW PHAHECLRMN YVQNEQAMEQ GIAIIAEEVQ KAYQQANV
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