| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2446 |
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| Symbol | |
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| ID | 5136084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2600045 |
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| End bp | 2601028 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640533898 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001218346 |
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| Protein GI | 147673818 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATATC GTCATTGCTG TTATTCTATT TTGGAAAAAC TCATGCAAAT TGAAAAATTG
GCCCGTATCG ATCTCAATCT ACTGGTCTGT TTAAAAGTAT TGATTGAAGA GTTAAGCGTC
ACGCGCGCGG CTGCACGTTT ATGTCTGAGC CAATCGGCCG TGAGTAAATC CTTAGCCAAG
CTACGCGAGC AGTTTGACGA CCCGTTGTTT GTTCGCACGT CTTATGGACT GAATGCGACC
CCGAAGGCGC TCTTCTTAAA ACCCAAACTG GATGTGTTGG TGAATCAGCT TGAGCTACTA
ACTCAGCCCG CACATTTCTC CCCCCAATCC AGCGAATATC GCTTTCAGAT CGCGGCGGTC
GAAAGTGTTT ATCCATTGAT CATGCCCTAC TTTTTACCGA CGATTTTTCG CCACGGTCCT
CATCTGAGCA TCAGCACCCA TGCATGGACT GAACAAACCT TCCGTAAATT ACAAGTTGGC
GAACTGGATT TCGGTCTGAC TGGTAAAGAC ATTGATATCA ATGATGCGAA GTTGACCTTA
TTGCCTCCTG CTGACATTTG TGAACAAGAG ATCTACCGCG ATAATCAGCG CTGTGTGGTG
CGCCGCGGCC ACCCGGTACT TCAGTATGAT TGGAATTTAT CCAGCTATCT CAACCTCCGT
CATGTACAAG TGCGCTGTGA TGGAAATGAT CGCTGGCTGC TGGATTATCG ATTAGCCGAT
CTCGGCTATG AGCGCGACAT TGCGATTACC GTACCAGACT TCAATAGTGC AGCCAGTTTG
TGCACCTATA CGGACTTTAT TTTTACCGCA CCGAGCCACT TTACTCACTG GGTCGCCAAG
CAGATGGATC TGGTTGAATT ACCATTACCG ATGGAGTTTC CACCTATGGC ATACACACTA
TTTTGGCATC GTGAACGAGA GAATGACCCT GCGCTGCGCT GGTTACGAGA ACTGATACAA
ACCAATACGC TTCATTTACG CTGA
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| Protein sequence | MVYRHCCYSI LEKLMQIEKL ARIDLNLLVC LKVLIEELSV TRAAARLCLS QSAVSKSLAK
LREQFDDPLF VRTSYGLNAT PKALFLKPKL DVLVNQLELL TQPAHFSPQS SEYRFQIAAV
ESVYPLIMPY FLPTIFRHGP HLSISTHAWT EQTFRKLQVG ELDFGLTGKD IDINDAKLTL
LPPADICEQE IYRDNQRCVV RRGHPVLQYD WNLSSYLNLR HVQVRCDGND RWLLDYRLAD
LGYERDIAIT VPDFNSAASL CTYTDFIFTA PSHFTHWVAK QMDLVELPLP MEFPPMAYTL
FWHRERENDP ALRWLRELIQ TNTLHLR
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