| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2424 |
|---|
| Symbol | |
|---|
| ID | 5136630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 2579293 |
|---|
| End bp | 2580162 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640533876 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218324 |
|---|
| Protein GI | 147674292 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3315] O-Methyltransferase involved in polyketide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTTCTT ATTTGAGATT CATTATCATC TTCCTATCCC AGCATAGGAA GATGAGCATG
CGCCACTCAG ATTCACCCAC CTCAGACCCA TACCAAGTTC CTGCGAATTT GGTTCAGCCA
CTTTGGCTGC GCAGCCGAGA AAGCTTGGTC GATAATGGCT TGGTGTATGA TCCGATTGCC
GCCAATGCTT GTCGTCGTTG CGCTTTAGCG CAAGACTGCC TGACGGGCGA TATCGCTCAA
AAGCAGTTAC TGCATGTCAC GCTAACTCAG CTTTGTGACC AACAAGTTCG CCACTTTCTT
GATACTCATC CTGATGGCTG GATCATTAAT GTCGGTGCAG GCCTCGACAC CCGTTTTTAT
CGAGTAGATA ACGGCCGCTG CCACTGGATT GAGTGGGATA TCACTGAAAA CCTGTTATGG
CGTGAGAAGC TATTTCACCG TAGTGAGCGC TATCAACTGG TGTGTGGTGA TGTGATGCAA
CCACAAGGAC TTGCCGAACT GCCGATCCCT GAATTCGCTC CTGTGCTGTT GGTCTGTGAA
CATGCCTTGC TCGATTGCGA TGCTCAGCAA GTGGCGCGTT TCGTGCGCTC TATCGGATTG
CATTTTGCCA AAGCCAGCGC CTGCCTTGTG GTGGCGGGAG ATAAAACCTC TAGCTATCTA
GGCCAAAAAC TGGGCTGTGA AGCTTATGCC CACGGGTTTA CCTGCGCAGG TGATGCCATC
ATCAATTGCT TGCCGTGGGC GAAATCGGTA CGCACATTTT CCCCACTGGA TCGCCATTGT
GATCGCTGGA AATTTTGGCA ACGCGCGATT GCACGCTCCG GCATTTACAA AACACGCTTA
ACCCCTGTTG TTGTTAACCT AGATTGGTAA
|
|---|
| Protein sequence | MPSYLRFIII FLSQHRKMSM RHSDSPTSDP YQVPANLVQP LWLRSRESLV DNGLVYDPIA
ANACRRCALA QDCLTGDIAQ KQLLHVTLTQ LCDQQVRHFL DTHPDGWIIN VGAGLDTRFY
RVDNGRCHWI EWDITENLLW REKLFHRSER YQLVCGDVMQ PQGLAELPIP EFAPVLLVCE
HALLDCDAQQ VARFVRSIGL HFAKASACLV VAGDKTSSYL GQKLGCEAYA HGFTCAGDAI
INCLPWAKSV RTFSPLDRHC DRWKFWQRAI ARSGIYKTRL TPVVVNLDW
|
|---|
| |