| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2387 |
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| Symbol | |
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| ID | 5136879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2540847 |
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| End bp | 2542391 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640533839 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001218287 |
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| Protein GI | 147673319 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3650] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCCT TGCCCTTCTG CGCCATGTCG CTCGCTATGC TGTTGCAAGC GTGCACCAAC
ACCACCTCCG TCAGTGTCGA GCCTGACTCC GCTCCAATTA TTCCAGCGAC CCTCGATAAA
CCGGAAACCA TTCAACCACA GAGCTTTATG CTGCGTGGCG AGGTGGTCGT GGGCCATGAG
GTGCGACGCT TTACGCCCTG TGGCAGCCAT CAGCAATACT GGCTCAATCT CTCGCCAGAG
CAACTGAATG AAGCGATGGC GCTGAATCGT AGTCCTTACC AACCTCTGTA TGGTGAGCTT
GTCGGCACAC TCACGCCACC AAGCCAAACG GGGTTTAACG GTGATTATGT GGCGCGAATT
GAGGTGCAGA GCATCAATCA ACTGAGCAAT GAAAGCCGCG GCTGTGAGCA GCCTCTTAGC
CCAACCCGTG CGTTTGGTAA TGAGCCTTTT TGGTCAATGC GCTTTGTAGA TGGCGGGCTA
CAATTCCAAC CTATGGGCGG TGACAAGCAA CAATTTTCGA TCACACGCAG TCAACTGAGC
CAAGATAAAC GACGCTACCA ATTTGATGGT GGTGAACTGC TGTTAGAACA AGGGCAATGT
CGCGATGGTA TGAGCGATAA CCTTTACCAA TGGCGCTCTA AACTCACCCT AAAAGGCGGC
CAATACCAAG GCTGTGCGAC CTTAGCTAAT CTTGATCCTA CCCTTGAATG GAGCGGCGTC
TACTTTGCCA GCTCGACTGA ACAGACGGGC TTTAGTGTCA GCTTAACCTT GGAAAAAGAT
CACACCGCGC AGACTCGCTA TGAGTATGCC AATGGCGAAC CGGCTGTCGT GGAGCAAGGC
TACTGGCAGC AGCTCAACCC CAATCAGATC CAAGTGGTGA TGACTCGCCA CCAGCAGCAG
TACTTGCTCT CCGAGCGCAT TTTCACTCGT GAGGGTTATC AGCTAACAGC GACACAAGAG
AAGGTTGGTC AATCGGTTTA TAACATCGCC GATGGAGGTT TAGTGCTGTT TCGCTCTCTG
GTCGAGTTGA ATGAAAGCGC TGTGCCCCCT GCCGTAGGAC AAGCGGCCAT TCACGCTCAG
CAAATCGCAG GACGCGCTGA CTATGAAGAA GATGTCGATC AGGCGATTCG CCGCTATTTT
AACTTGCACC AAACGTCGCC AGACAATACG CAATATCGCT GGTTGAAGTA CGATCTCAAC
GGTGATGAAC AACCGGAACT GCTGGTGCAA CTAGACTGGT GTGGTACTGG CGGCTGTACT
TTGCTGATTT TCGATCAACA CAATCAGCAG TGGCGTTTCA ATAGCCGCAT CACTCTCGTA
CAAAACCCGA TCCGTTTAGG TAAACAGACC CATCATGGCT GGCAAGACTT ACTGTTCAGT
GTCAGTGGCG GCGGCGCGAA ACCCGCTATA CACCGTTTAC AATACAACGG CATCAGCTAC
CCGACGAACC CAAGTGTGGC ACCAGAAGCC AACGCCGAGC AAATCAGCCA AGTGGTACTG
TTTGCCGATG GCCTCTCGCC AAGACAGTCA GGCATTAAAC TATGA
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| Protein sequence | MRALPFCAMS LAMLLQACTN TTSVSVEPDS APIIPATLDK PETIQPQSFM LRGEVVVGHE
VRRFTPCGSH QQYWLNLSPE QLNEAMALNR SPYQPLYGEL VGTLTPPSQT GFNGDYVARI
EVQSINQLSN ESRGCEQPLS PTRAFGNEPF WSMRFVDGGL QFQPMGGDKQ QFSITRSQLS
QDKRRYQFDG GELLLEQGQC RDGMSDNLYQ WRSKLTLKGG QYQGCATLAN LDPTLEWSGV
YFASSTEQTG FSVSLTLEKD HTAQTRYEYA NGEPAVVEQG YWQQLNPNQI QVVMTRHQQQ
YLLSERIFTR EGYQLTATQE KVGQSVYNIA DGGLVLFRSL VELNESAVPP AVGQAAIHAQ
QIAGRADYEE DVDQAIRRYF NLHQTSPDNT QYRWLKYDLN GDEQPELLVQ LDWCGTGGCT
LLIFDQHNQQ WRFNSRITLV QNPIRLGKQT HHGWQDLLFS VSGGGAKPAI HRLQYNGISY
PTNPSVAPEA NAEQISQVVL FADGLSPRQS GIKL
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