| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2364 |
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| Symbol | |
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| ID | 5137414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2517893 |
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| End bp | 2520082 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640533816 |
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| Product | site-specific recombinase, phage integrase family protein |
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| Protein accession | YP_001218264 |
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| Protein GI | 147674376 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACTT TTGAAAACCC ACAAAATCTA GACTTAACAT TAGGTGCTAT GCGCTCCATT
GGCGATCAAG AAGATTATTT GCAGCAGGTA CTTCTCCCTG CACTACTGCG AGGTAACTGG
GAAGAATTAG ACAAGATGGT TGTCTATCAA GATGAGAAAA AGACTATCTT GTTTGAGGAA
GATCTATGGG CGTTTAGAGA GTCTGCTTGT AAAGCAAAAG GCATAGCGAA CCTGTATTTT
AATATTGAGC TAGAACAAGG TGAGAATGTC ATTGCTCTTC GTCAAAATGA GCGTCACTTG
GTTAATCAAA TGAAATGCGC GGCATTAGCT TATATGTGGT TTTCAGCTAA GCACATAGAG
CTGGGTTCCA TCAAAACTAA AGTAAACGTT CTTCGGAATG ATATTGCTCA ACTTATTAAG
CGTGGCATCA CTTCATTTGA AGAGTTAAAT CTAGAGCACC TTGAAATTTT GGTTGATGAA
GGATGTTTTG AAATATCTAA AAGCCACCCA TTTAGAGGGT TAAACTCTTT TCCCGCTTTA
AAAGGCTTAC TGCCCTTCAA GGTTAACTTT TCGCATCTGA CTCATAAGAT GTTTAACACA
AGACCTGAGG TGTCGGAAGG TAAATTAGTG ATCCCTCCTA GGATCTATTT TTCGGCATTG
ACAGAGTACA GCAAAGATGT CGTAAACGCC TATGGATTGA GAGATGAAAT CGAACAAGCG
GTTGAGAAGA TGATTTCCTA TTATGATAAT GAAGTAATAA ATAGAACTTT GAAAATAAGA
AATGGATATA GTTATTCACC TATTAAAGGG TATCGAAAAA CATGGGAACG ATTTACCCAA
GCGCTAGACA ATGAAGGGGT TGCCTTGGCT GATAAAGGTG AAGATCCACG ATGGATGAAA
ATATTCATCT CGCTTGAAAC CTTTATTGAG CCACGTCAAA GTGTAATTAA GAACTTCAAA
GTATGGATTG GTGACACTTG TTATGGGTGG AGTGATTTTA AAAGGTATTT GGTCGGTTTG
AGCGCAAAAG CCTCGTGGTT ATGTTTAGCG CTATCAGGGA TGCGTGTAGA CGAGTTGTAC
AAAATTAGCC CTGTCTACGG GACGCAAAAA ATGATGTTCG ATAAAAATGG CTGTGAGTCC
GATACTGGTA ATGAAACTAT TTACTTTTTA AGTACACGCC AATCAAAAAT TACACTAAAC
AGCCAAACCA AAAACGACAC CTTTGTTACC ACCGAAATGG GTTGGAAAGC ATTTCATGTG
TTAAATTCCA TTCATACGCC TTATCGAAAC AGGTTTCCAG AAAAGGACAG ACATCGAATG
TTCGCAAATT TGGCTAACAA TCAATATTTC AAGCCTGTAA AAAAGGCGGC GCTAGGTAAA
TCAATCAAAA ATAATTTTAA TAAAGACAAA TTTGATTTTA TTCTGACGGT TGAAGATATG
GGCTATTTAC AAGCCTCAGA CCCAGCCCAG AAGTCCTTTA AACTGGGAGA TAAGTTTCAC
TTTACGACAC ATCAGACAAG ACGCTCACTT GCTTATTACC TAATTGGTTA TGAGCTATGT
TCTTTCCCTG CTTTGAAGCA ACAGTTGTCA CATTTGTCGA TGGCGATGAC GAGATGGTAT
GCCCGTAATG CCCATTCATT TGAACAGCTT TACAGTGAAA TTAGCAAAGA GCGGATCACT
CAAAAGGCTG AAATTTTTGC TCGCATATAT CAAAAAATGG CGAACGGTGA ACGGATTGCA
GGTGGCAAAG GTCAAGCAAT GGTTGCTGAA ATCAGTCGTG AAGGTGAAAG CTATTTTGAA
AATGGGGTAA ACAAACGCAA GTTATCAATT GATTATTGGA TTGATCAGTT AACTAACGGT
AAGGCGCACT TACATGCCGT TGCTCCTAGT ATGTATTGCA CCAACACTCA ATGTTCAATG
CGCATCAATA TTGATTTAAG TGAGTGTGTG GACTGCGAAT ACGATTTTAT TGAAAACGCT
GTTTATGCCG AATCTTCTCG CATGGATGCG ATGAGAAATA TTGAGTTTCT AAAAGAATGC
GGTGACTTGA ACTCCAGTGC CGCAACTAAA TACTTTATGC AGGTAAAAGC GGCAGAGGCG
ATCATGGATG ATTTGGGATT CGACCATGAT AAGTATGAGT TTGCAGAAGA TGTGCGGAGT
TTAGTTATAA ACACGATAAT GGTGGCGTAA
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| Protein sequence | MLTFENPQNL DLTLGAMRSI GDQEDYLQQV LLPALLRGNW EELDKMVVYQ DEKKTILFEE
DLWAFRESAC KAKGIANLYF NIELEQGENV IALRQNERHL VNQMKCAALA YMWFSAKHIE
LGSIKTKVNV LRNDIAQLIK RGITSFEELN LEHLEILVDE GCFEISKSHP FRGLNSFPAL
KGLLPFKVNF SHLTHKMFNT RPEVSEGKLV IPPRIYFSAL TEYSKDVVNA YGLRDEIEQA
VEKMISYYDN EVINRTLKIR NGYSYSPIKG YRKTWERFTQ ALDNEGVALA DKGEDPRWMK
IFISLETFIE PRQSVIKNFK VWIGDTCYGW SDFKRYLVGL SAKASWLCLA LSGMRVDELY
KISPVYGTQK MMFDKNGCES DTGNETIYFL STRQSKITLN SQTKNDTFVT TEMGWKAFHV
LNSIHTPYRN RFPEKDRHRM FANLANNQYF KPVKKAALGK SIKNNFNKDK FDFILTVEDM
GYLQASDPAQ KSFKLGDKFH FTTHQTRRSL AYYLIGYELC SFPALKQQLS HLSMAMTRWY
ARNAHSFEQL YSEISKERIT QKAEIFARIY QKMANGERIA GGKGQAMVAE ISREGESYFE
NGVNKRKLSI DYWIDQLTNG KAHLHAVAPS MYCTNTQCSM RINIDLSECV DCEYDFIENA
VYAESSRMDA MRNIEFLKEC GDLNSSAATK YFMQVKAAEA IMDDLGFDHD KYEFAEDVRS
LVINTIMVA
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