| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2273 |
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| Symbol | |
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| ID | 5136247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2423598 |
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| End bp | 2425751 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533729 |
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| Product | pullulanase |
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| Protein accession | YP_001218189 |
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| Protein GI | 147674082 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGACC CTTACTCGCA CAGTTTGGCC ATCAATTCAC TCTACAGTCA GGTAGTGGAT
CTCAATCATG CCGATCTCAA ACCTGAGGGC TGGGATACGT TAGCTGCGCC ACATCCACAA
CACGAGCGTG CCGATTTTAT TTTGTATGAA GCTCACGTCC GTGATTTTTC TGCCCACGAC
ACCACCGTCA CTTCGGCGCA CCGCGGTAAA TTTGCCGCCT TTAGCGAGCA AGAGAGTCAG
CCCGTACAAC ATTTAAAACA GCTAGCTCGT TCTGGTGTGA CCCATCTGCA TTTGCTGCCC
GTGTTTGATA TTGCCACCAT CAATGAAGAC CCAGAGCAAG TGGTCAATTT GGATCAGCCA
TTTAGCCGTT TGTGTGATCT CAAACCCGTA CTCAAAAACG ACAGTGACTT AGCGGCTTAC
TGCACTGGTA ATGACACACT GCAAAGCGTC TTTACCACGT TAAAAGCCAA AGACTCGAAA
GAGCAGCCTC TCGTGCAGCG TTTAAATGGT TTTCTGCGTG ATGTGGATAG CTTCAACTGG
GGCTATGATC CGTTCCACTA CACCGTGCCT GAAGGCTCGT ATGCCACTCA ACCTGACGGC
GTTACCCGCA TCAAAGAATT TCGTGAGATG GTGCAAGCGG TCAAACAAGA GATTGGGATG
AATGTGGTGA TGGATGTGGT TTACAACCAC ACCAACGAAG CGGGGGTTTC GGATAAATCG
GTACTGGATC GCATCGTCCC TTGGTACTAC CAACGCTTGA ATGAGTGGAG TGGTCAGGTC
GAGAATTCTA CTTGCTGCTC GAATACCGCA CCGGAAAATC GCATGTTTGC TAAGTTGATT
GATGATTCGA TTCGTACTTG GGTTAAAGAG TACAAAATCG ATGCCTTCCG CTGGGATTTG
ATGGGACATC ACCCACTGGC GCAAATTGAG CAAACCTTAA CGGCGGCCAA GCAAATCAAT
CCTGATGTTT ACTTCTACGG CGAAGGTTGG AACTTTGGCG AAGTGGCGAA TGATCGCCAA
TTCAAACAGG CAACCCAACC CAATTTGGCC GGAACGGGCA TTGGCTCGTT TTCAGATCGT
CTGCGTGATG CCGTGCGCGG TGGCGGCCCA TTTGATGGCG AAGCGAGCCT ACGCGCTAAC
CAAGGCTGGG GTAACGGTAT TTATGTGCAA AAAAATGATC TGAGCAACAA CACGCGAGCT
CAAGCACTGC ACTTGGCAGA TTTAACTCGC CTTGGTATGG CTGGGAATTT AAAAGCCTTC
ACCTTTATTG ACCAAACAGG CAACACCATC AAGGGCTCAG AACTCGACTA CAACGGCCAA
GCGGCAGGTT ATGCCAATGA TGCATGGGAG ATCCAAAACT ATGTTTCTAA GCACGATAAC
CAAACCTTGT GGGATAACCA GCAGTACAAA ATTGACTATG CGCTGCCACT ACACACTCGA
GTGCACATGC AAGCGGTCAG CTTAGCGACG GCGGTATTAG GCCAAGGTGT GCCTTTTGTA
CACATGGGAA GCGAGTTACT GCGTTCTAAA TCCATGCAGC GTGACTCTTA CGACTCTGGT
GACTGGTATA ACCGCGTTGA TTTTAGCAAA ACCAGCAATA ACTGGAATGT GGGCCTGCCA
CGTCAAGACA AGGACGGCAG CAACTGGTCG ATCATTGAAA CCGTGATTGC ACAAGCCGGA
GCCAATGCCG AGCCACAAGC CGTCGACATT ACCACCATGA ATGATTATTT CAATGAATTG
GTGCAACTGC GTCGCTCGTC ATCCCTACTC ACGTTAGGCA AAGGCAGTGA GATCATCAAA
CGCGTCCATT TCCACAACAC AGGCAGTGAG CAAATTCCGG GCGTCATAGT GATGAGCATT
GATAACCAAG GCGATCTGCA TGATGCTTCC CTCGATGCTG CGCGATCAGG CTTGGTGGTG
GTACTCAACG CCAGCCCAAC ACCGCTCACC GAGTTTGCCC ACTTTGATGC CACCGATTAT
CAGTTGCATG CCATTCAAGC GGATCTGGGT AATCGTTCCA TCGCTTATAA TGGCGTAGCC
GCGAGCGTTG TTAACCAGCG ACTGAGCGTT CCTGCATGGT CAGTCGCCGT CTTTGAAAAA
CGACATCCTA AAGTAAGGGG AAAGCTTTCG CATCCTCGAA TCAACAACAC CTAA
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| Protein sequence | MTDPYSHSLA INSLYSQVVD LNHADLKPEG WDTLAAPHPQ HERADFILYE AHVRDFSAHD
TTVTSAHRGK FAAFSEQESQ PVQHLKQLAR SGVTHLHLLP VFDIATINED PEQVVNLDQP
FSRLCDLKPV LKNDSDLAAY CTGNDTLQSV FTTLKAKDSK EQPLVQRLNG FLRDVDSFNW
GYDPFHYTVP EGSYATQPDG VTRIKEFREM VQAVKQEIGM NVVMDVVYNH TNEAGVSDKS
VLDRIVPWYY QRLNEWSGQV ENSTCCSNTA PENRMFAKLI DDSIRTWVKE YKIDAFRWDL
MGHHPLAQIE QTLTAAKQIN PDVYFYGEGW NFGEVANDRQ FKQATQPNLA GTGIGSFSDR
LRDAVRGGGP FDGEASLRAN QGWGNGIYVQ KNDLSNNTRA QALHLADLTR LGMAGNLKAF
TFIDQTGNTI KGSELDYNGQ AAGYANDAWE IQNYVSKHDN QTLWDNQQYK IDYALPLHTR
VHMQAVSLAT AVLGQGVPFV HMGSELLRSK SMQRDSYDSG DWYNRVDFSK TSNNWNVGLP
RQDKDGSNWS IIETVIAQAG ANAEPQAVDI TTMNDYFNEL VQLRRSSSLL TLGKGSEIIK
RVHFHNTGSE QIPGVIVMSI DNQGDLHDAS LDAARSGLVV VLNASPTPLT EFAHFDATDY
QLHAIQADLG NRSIAYNGVA ASVVNQRLSV PAWSVAVFEK RHPKVRGKLS HPRINNT
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