| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2241 |
|---|
| Symbol | |
|---|
| ID | 5135119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 2390072 |
|---|
| End bp | 2390512 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640533697 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001218157 |
|---|
| Protein GI | 147674718 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3152] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAC AAACACTGTT GTTTTCTTTT CAGGGGCGTA TTGGTCGCCA AGCTTTCTGG
CTGTGGAATA TTTGCTACTA CGCCATGATT GCCGGTTTTG CAATGGGATC GAATCTGCTA
TTTCCCGATG TTGCGCACCT GATCTTGCCG GTTTTTCTGC TGGTAGTCTT AGTGCCAGAT
TTGGCGATTA CCGCTAAGCG TTGGCATGAT CGTGACAAAT CAAGCTGGTG GTTGCTACTC
AATGTGCCGC TTGTGATTGG CCGCATGACG ATTCCGGCAG GAGAATTGGC CGTGAATACC
CAACCCGGCA TGCTGGAAAC ACTTATCTCG TTTGTGGCCT TACTGTGTGG TGCATGGATT
TTGGTGGAGT GCGGATTTCT TTCTGGCACG GATGGCAGTA ACCGTTTTGG CGCCGAGCCG
AAGTGGATCA AAAAAAGCTA G
|
|---|
| Protein sequence | MSLQTLLFSF QGRIGRQAFW LWNICYYAMI AGFAMGSNLL FPDVAHLILP VFLLVVLVPD
LAITAKRWHD RDKSSWWLLL NVPLVIGRMT IPAGELAVNT QPGMLETLIS FVALLCGAWI
LVECGFLSGT DGSNRFGAEP KWIKKS
|
|---|
| |