| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2126 |
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| Symbol | |
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| ID | 5135675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2283963 |
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| End bp | 2285711 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533582 |
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| Product | hypothetical protein |
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| Protein accession | YP_001218042 |
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| Protein GI | 147673985 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCGT TGTATAACGA GTCTAAATCA AGCATGAGAC GAAAATCACT TCCCGCTTTA
ATCTCGCTAT GGCTGTTTTC AGCCGTATCT TACGCCGATG TGAAGCTCGA GATCACTGGA
ATAAGTGGCG CAGAGAAAGA TAACGTGGAG GCGTATCTCT CATCGATCGC AGCACAAGAC
TATTCCACCA GTCTGCGTTT TCAATCTCAA CTGGAAAGAA GTATGACCGA AGCGTTGAAT
GCACTCGGCT ACTACCACCC CAGTATCGAT TTTACTGTCT CTGAAGATAA CCAGCGTTTA
CGCGCCGCAG TGACCTTGGG CGAAGTGACC CGTTTGAGCG AGGTTGATAT TGTGATCCGC
GGTGAAGCCG AAGGCGATCG CGATTTTCAA CGTTTGATCC GCCGCAGTGG TTTGAGAGTG
GATGCGCCGC TCAATCACAG TCTGTATGAC AACCTCAAAT CGGGCATTCG TAACTTGGCG
TTGCAAAAAG GCTACTTTAA TGGTGATTTT CAGGCCAGCC GGCTGGAAGT GATTCCAGAG
CTGAATCAAG CTCGGGTGAT TTTGCACTTT GATAGCGGGA TCCGTTACCT GTTTGGAGCG
ACCACGGTCG AAGGCAGTCA AATCGATGAA AATCGCGTGA TGTCGCTGCG CCCTTTCAAA
CAAGGCGAGC CCTATTTGGT GTCGCAAGTC GGCGAGTTTA ACCAAAATCT TTCCAATACA
GATTGGTTCT CTTCGGTGTT TGTTGAGCCG GACTTATCGC AGTTGGATGA GGGGCGTGAG
TTGCCGATCA AGGTGACCTT AGCACCGCAA GCACGCAATC AACTGGAAAC CGGTTTAGGC
TATTCCACGG ACGTTGGAGT ACGTGGTTCA TTAAAATGGA AGAAACCTTG GGTGAACAGC
CAAGGGCACA GTTTTGACAG CAGTTTCTCT CTTTCTATAC CAGAGCAGAC CATTACGGCG
GGTTACAAGA TCCCACTGGA AGATGCGTTA AATGAGTACT ATCGCATTCA GTACGGGATG
AAGCATTTGG ACAAGCGTGA TACCGAGAGC TTGGAATCTA ATCTATCACT TGAACGCCAT
TGGCAGTTGG ATGGCGGCTG GCATCGCACG GTCTTTATTC GTTATCTCTT AGAGAATTAT
CGTCAGGGTT TACAAGATGA TAACAGCCAA TTTTTATTGC CGGGGATGAC TTATACCCGT
ACGCGGACTC GCTCCAACAG TGGCTTACTG ACTTGGGGCG ATAAACAGAC GATTACCTTG
GAATATGGCG ATCCAGCATT GCTTTCAGAA ACACGGGTAT TGCGTTTACA AACCGGATCT
TCTTGGTTAC GAACTTATGC ACGCAATCAC CGCGCCTTAG TTCGCGTTGA TGGTGGAGCC
AACTTGGTGG ATGAATTTGA CCAACTCTCG CCCTCGCTGC GTTTCTTTGC CGGTGGTGAT
AACAATTTGC GCGGATACGG TTACAAGTCG ATTTCACCGC AAGATGCCAG TGGCGCCTTG
ACGGGGGCGA AATACATCGC CACCAGCTCA ATCGAATATC AATACCGTTT AACCGGCAAC
TGGTGGGCGG CGATGTTCAT GGATGTCGGT GATGCGTTTA ACGATAATCC TGAATGGAAG
AAAGGGGTCG GTACTGGGAT CCGCTGGATT TCGCCCGTTG GTCCTATTCG GCTCGATTTC
GCATGGGGGC TGGATGCCGC GCCGGGCGAT GAGTTCAAAA TCCACTTCAC TTTAGGGCCT
GAATTATGA
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| Protein sequence | MSPLYNESKS SMRRKSLPAL ISLWLFSAVS YADVKLEITG ISGAEKDNVE AYLSSIAAQD
YSTSLRFQSQ LERSMTEALN ALGYYHPSID FTVSEDNQRL RAAVTLGEVT RLSEVDIVIR
GEAEGDRDFQ RLIRRSGLRV DAPLNHSLYD NLKSGIRNLA LQKGYFNGDF QASRLEVIPE
LNQARVILHF DSGIRYLFGA TTVEGSQIDE NRVMSLRPFK QGEPYLVSQV GEFNQNLSNT
DWFSSVFVEP DLSQLDEGRE LPIKVTLAPQ ARNQLETGLG YSTDVGVRGS LKWKKPWVNS
QGHSFDSSFS LSIPEQTITA GYKIPLEDAL NEYYRIQYGM KHLDKRDTES LESNLSLERH
WQLDGGWHRT VFIRYLLENY RQGLQDDNSQ FLLPGMTYTR TRTRSNSGLL TWGDKQTITL
EYGDPALLSE TRVLRLQTGS SWLRTYARNH RALVRVDGGA NLVDEFDQLS PSLRFFAGGD
NNLRGYGYKS ISPQDASGAL TGAKYIATSS IEYQYRLTGN WWAAMFMDVG DAFNDNPEWK
KGVGTGIRWI SPVGPIRLDF AWGLDAAPGD EFKIHFTLGP EL
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